RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 VPS4AQ9UN37 437 aa6.33□□□□□ -1.4
TVP23B-210ENST00000582288 RNF215Q9Y6U7 377 aa6.33□□□□□ -1.4
TVP23B-210ENST00000582288 WASF2Q9Y6W5 498 aa6.33□□□□□ -1.4
TVP23B-210ENST00000582288 LRRK1Q38SD2 2015 aa6.33□□□□□ -1.4
TVP23B-210ENST00000582288 TDRD6O60522 2096 aaKnown RBP6.32□□□□□ -1.4
TVP23B-210ENST00000582288 DOCK9Q9BZ29 2069 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 SPTAN1Q13813 2472 aaKnown RBP6.32□□□□□ -1.4
TVP23B-210ENST00000582288 IGLON5A6NGN9 336 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 K7ERQ8 282 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 M0QYV0 167 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 MTSS1O43312 755 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 ZNF821O75541 412 aaPredicted RBP6.32□□□□□ -1.4
TVP23B-210ENST00000582288 CNTN5O94779 1100 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 RASGRP1O95267 797 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 GLI1P08151 1106 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 CTSEP14091 401 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 SYT1P21579 422 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 MAP4P27816 1152 aaKnown RBP6.32□□□□□ -1.4
TVP23B-210ENST00000582288 HTR1BP28222 390 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 TNFRSF8P28908 595 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 CASP1P29466 404 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 UGT1A3P35503 534 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 GPD2P43304 727 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 RGS7P49802 495 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 SUOXP51687 545 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 ARSDP51689 593 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 MAPK10P53779 464 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 RAB15P59190 212 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 ADAM9Q13443 819 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 SQSTM1Q13501 440 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 CUL4AQ13619 759 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 AUHQ13825 339 aaKnown RBP6.32□□□□□ -1.4
TVP23B-210ENST00000582288 HLTFQ14527 1009 aaKnown RBP eCLIP6.32□□□□□ -1.4
TVP23B-210ENST00000582288 C16orf72Q14CZ0 275 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 EDRF1Q3B7T1 1238 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 KRTAP21-3Q3LHN1 58 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 HIST2H2BCQ6DN03 193 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 TCTN3Q6NUS6 607 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 FAM173BQ6P4H8 233 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 C22orf39Q6P5X5 142 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 DPY19L3Q6ZPD9 716 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 PARS2Q7L3T8 475 aaKnown RBP6.32□□□□□ -1.4
TVP23B-210ENST00000582288 TMEM110Q86TL2 294 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 PIM3Q86V86 326 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 HEATR4Q86WZ0 1026 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 CEP57L1Q8IYX8 460 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 TFAP2BQ92481 460 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 ISG20Q96AZ6 181 aaKnown RBP6.32□□□□□ -1.4
TVP23B-210ENST00000582288 FAM149B1Q96BN6 582 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 TEFMQ96QE5 360 aaKnown RBP6.32□□□□□ -1.4
TVP23B-210ENST00000582288 RBM15Q96T37 977 aaKnown RBP eCLIP6.32□□□□□ -1.4
TVP23B-210ENST00000582288 PSMB7Q99436 277 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 DPYSL5Q9BPU6 564 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 HEPHQ9BQS7 1158 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 OSBPL1AQ9BXW6 950 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 MIS12Q9H081 205 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 MUC3BQ9H195 1237 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 PRDM8Q9NQV8 689 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 VPS51Q9UID3 782 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 GPR34Q9UPC5 381 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 KCTD3Q9Y597 815 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 ADGRG1Q9Y653 693 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 DGKBQ9Y6T7 804 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 KIF26BQ2KJY2 2108 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 OTOGQ6ZRI0 2925 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 NOTCH2Q04721 2471 aa6.32□□□□□ -1.4
TVP23B-210ENST00000582288 WIPF3A6NGB9 483 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 B4E171 279 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 RNF103O00237 685 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 PIK3R2O00459 728 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 NEMP1O14524 444 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 MSTNO14793 375 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 AREL1O15033 823 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 SMAD6O43541 496 aaKnown RBP6.31□□□□□ -1.4
TVP23B-210ENST00000582288 TM7SF2O76062 418 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 RHOBTB3O94955 611 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 PRKCGP05129 697 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 RHOCP08134 193 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 KRT7P08729 469 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 FGF3P11487 239 aaPredicted RBP6.31□□□□□ -1.4
TVP23B-210ENST00000582288 POU3F2P20265 443 aaPredicted RBP6.31□□□□□ -1.4
TVP23B-210ENST00000582288 FECHP22830 423 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 MAN1A1P33908 653 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 IGFALSP35858 605 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 TSPAN7P41732 249 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 SERPINH1P50454 418 aaKnown RBP6.31□□□□□ -1.4
TVP23B-210ENST00000582288 B4GALNT1Q00973 533 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 CDC20Q12834 499 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 ARHGEF7Q14155 803 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 NFATC4Q14934 902 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 NR1D2Q14995 579 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 AGERQ15109 404 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 ALG11Q2TAA5 492 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 C14orf28Q4W4Y0 310 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 ZCWPW2Q504Y3 356 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 ZNF805Q5CZA5 627 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 CARD16Q5EG05 197 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 EFHC2Q5JST6 749 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 PHF19Q5T6S3 580 aa6.31□□□□□ -1.4
TVP23B-210ENST00000582288 MAMDC2Q7Z304 686 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms