RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 SLC39A10Q9ULF5 831 aa22.88■■□□□ 1.25
CCDC47-204ENST00000582252 A0A1B0GVM2 712 aa22.87■■□□□ 1.25
CCDC47-204ENST00000582252 TCAF2A6NFQ2 919 aa22.87■■□□□ 1.25
CCDC47-204ENST00000582252 GOLGA8TH3BQL2 631 aa22.87■■□□□ 1.25
CCDC47-204ENST00000582252 H2AFYO75367 372 aaKnown RBP22.87■■□□□ 1.25
CCDC47-204ENST00000582252 RASSF9O75901 435 aa22.87■■□□□ 1.25
CCDC47-204ENST00000582252 C2P06681 752 aa22.87■■□□□ 1.25
CCDC47-204ENST00000582252 CNPP09543 421 aaKnown RBP22.87■■□□□ 1.25
CCDC47-204ENST00000582252 COL6A2P12110 1019 aa22.87■■□□□ 1.25
CCDC47-204ENST00000582252 CHRNA4P43681 627 aa22.87■■□□□ 1.25
CCDC47-204ENST00000582252 ERVK-21P61565 698 aa22.87■■□□□ 1.25
CCDC47-204ENST00000582252 TWF1Q12792 350 aa22.87■■□□□ 1.25
CCDC47-204ENST00000582252 USP10Q14694 798 aaKnown RBP22.87■■□□□ 1.25
CCDC47-204ENST00000582252 PCLAFQ15004 111 aa22.87■■□□□ 1.25
CCDC47-204ENST00000582252 CNGA3Q16281 694 aa22.87■■□□□ 1.25
CCDC47-204ENST00000582252 CLEC14AQ86T13 490 aa22.87■■□□□ 1.25
CCDC47-204ENST00000582252 SETD3Q86TU7 594 aaPredicted RBP22.87■■□□□ 1.25
CCDC47-204ENST00000582252 LMNTD2Q8IXW0 634 aa22.87■■□□□ 1.25
CCDC47-204ENST00000582252 TCEAL8Q8IYN2 117 aa22.87■■□□□ 1.25
CCDC47-204ENST00000582252 PPP4R1Q8TF05 950 aa22.87■■□□□ 1.25
CCDC47-204ENST00000582252 FEM1CQ96JP0 617 aa22.87■■□□□ 1.25
CCDC47-204ENST00000582252 SEMA3CQ99985 751 aa22.87■■□□□ 1.25
CCDC47-204ENST00000582252 WWP1Q9H0M0 922 aa22.87■■□□□ 1.25
CCDC47-204ENST00000582252 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.86■■□□□ 1.25
CCDC47-204ENST00000582252 LOC285095A0A1B0GVY8 99 aa22.86■■□□□ 1.25
CCDC47-204ENST00000582252 ILVBLA1L0T0 632 aa22.86■■□□□ 1.25
CCDC47-204ENST00000582252 DNAJC6O75061 913 aa22.86■■□□□ 1.25
CCDC47-204ENST00000582252 EPOP01588 193 aa22.86■■□□□ 1.25
CCDC47-204ENST00000582252 FGF1P05230 155 aa22.86■■□□□ 1.25
CCDC47-204ENST00000582252 RHOCP08134 193 aa22.86■■□□□ 1.25
CCDC47-204ENST00000582252 CPA3P15088 417 aa22.86■■□□□ 1.25
CCDC47-204ENST00000582252 CD151P48509 253 aa22.86■■□□□ 1.25
CCDC47-204ENST00000582252 OXCT1P55809 520 aa22.86■■□□□ 1.25
CCDC47-204ENST00000582252 ERVFC1P60507 584 aa22.86■■□□□ 1.25
CCDC47-204ENST00000582252 ZNF177Q13360 481 aaPredicted RBP22.86■■□□□ 1.25
CCDC47-204ENST00000582252 SLC12A1Q13621 1099 aa22.86■■□□□ 1.25
CCDC47-204ENST00000582252 ADGRF1Q5T601 910 aa22.86■■□□□ 1.25
CCDC47-204ENST00000582252 FBXW10Q5XX13 1052 aa22.86■■□□□ 1.25
CCDC47-204ENST00000582252 ALG1LQ6GMV1 187 aa22.86■■□□□ 1.25
CCDC47-204ENST00000582252 WDR75Q8IWA0 830 aaKnown RBP22.86■■□□□ 1.25
CCDC47-204ENST00000582252 PGBD5Q8N414 524 aa22.86■■□□□ 1.25
CCDC47-204ENST00000582252 C2CD4AQ8NCU7 369 aaPredicted RBP22.86■■□□□ 1.25
CCDC47-204ENST00000582252 RDH11Q8TC12 318 aa22.86■■□□□ 1.25
CCDC47-204ENST00000582252 MYEOVQ96EZ4 313 aa22.86■■□□□ 1.25
CCDC47-204ENST00000582252 KLF16Q9BXK1 252 aaPredicted RBP22.86■■□□□ 1.25
CCDC47-204ENST00000582252 HEY2Q9UBP5 337 aa22.86■■□□□ 1.25
CCDC47-204ENST00000582252 UBA2Q9UBT2 640 aaPredicted RBP22.86■■□□□ 1.25
CCDC47-204ENST00000582252 GSRP00390 522 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 AHSGP02765 367 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 SERPINF2P08697 491 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 MYL2P10916 166 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 FGF3P11487 239 aaPredicted RBP22.85■■□□□ 1.25
CCDC47-204ENST00000582252 NQO1P15559 274 aaKnown RBP22.85■■□□□ 1.25
CCDC47-204ENST00000582252 RAB30Q15771 203 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 PABPC1LQ4VXU2 614 aaKnown RBP22.85■■□□□ 1.25
CCDC47-204ENST00000582252 NEPROQ6NW34 567 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 MTDHQ86UE4 582 aaKnown RBP22.85■■□□□ 1.25
CCDC47-204ENST00000582252 ARID3BQ8IVW6 561 aaPredicted RBP22.85■■□□□ 1.25
CCDC47-204ENST00000582252 MRPL43Q8N983 215 aaKnown RBP22.85■■□□□ 1.25
CCDC47-204ENST00000582252 PEX13Q92968 403 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 CINPQ9BW66 212 aaPredicted RBP22.85■■□□□ 1.25
CCDC47-204ENST00000582252 KCNK13Q9HB14 408 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 MSRAQ9UJ68 235 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 YBX2Q9Y2T7 364 aaKnown RBP22.85■■□□□ 1.25
CCDC47-204ENST00000582252 INSL5Q9Y5Q6 135 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 ANAPC1Q9H1A4 1944 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 KDELR3O43731 214 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 CES1P23141 567 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 CRABP2P29373 138 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 SLC1A6P48664 564 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 PLPP4Q5VZY2 271 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 ZNF470Q6ECI4 717 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 SPRED2Q7Z698 418 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 DNAJB7Q7Z6W7 309 aaPredicted RBP22.85■■□□□ 1.25
CCDC47-204ENST00000582252 RAB3IPQ96QF0 476 aaPredicted RBP22.85■■□□□ 1.25
CCDC47-204ENST00000582252 PBX4Q9BYU1 374 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 CAB39LQ9H9S4 337 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 NMRAL1Q9HBL8 299 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 SLC2A6Q9UGQ3 507 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 FBXO5Q9UKT4 447 aa22.85■■□□□ 1.25
CCDC47-204ENST00000582252 TNRC18O15417 2968 aaPredicted RBP22.85■■□□□ 1.25
CCDC47-204ENST00000582252 HAUS5O94927 633 aa22.84■■□□□ 1.25
CCDC47-204ENST00000582252 RALBP11234 206 aa22.84■■□□□ 1.25
CCDC47-204ENST00000582252 KCNA4P22459 653 aa22.84■■□□□ 1.25
CCDC47-204ENST00000582252 ARNTP27540 789 aa22.84■■□□□ 1.25
CCDC47-204ENST00000582252 HOXD9P28356 352 aaPredicted RBP22.84■■□□□ 1.25
CCDC47-204ENST00000582252 BMP8BP34820 402 aa22.84■■□□□ 1.25
CCDC47-204ENST00000582252 SLC1A2P43004 574 aa22.84■■□□□ 1.25
CCDC47-204ENST00000582252 KPNA2P52292 529 aaKnown RBP22.84■■□□□ 1.25
CCDC47-204ENST00000582252 PRKAA2P54646 552 aa22.84■■□□□ 1.25
CCDC47-204ENST00000582252 SLC12A2P55011 1212 aa22.84■■□□□ 1.25
CCDC47-204ENST00000582252 SIRPB2Q5JXA9 342 aa22.84■■□□□ 1.25
CCDC47-204ENST00000582252 ZNF783Q6ZMS7 281 aa22.84■■□□□ 1.25
CCDC47-204ENST00000582252 CLNKQ7Z7G1 428 aa22.84■■□□□ 1.25
CCDC47-204ENST00000582252 GALNT7Q86SF2 657 aa22.84■■□□□ 1.25
CCDC47-204ENST00000582252 TBC1D1Q86TI0 1168 aaPredicted RBP22.84■■□□□ 1.25
CCDC47-204ENST00000582252 C10orf107Q8IVU9 208 aa22.84■■□□□ 1.25
CCDC47-204ENST00000582252 INPP5DQ92835 1189 aa22.84■■□□□ 1.25
CCDC47-204ENST00000582252 SKA1Q96BD8 255 aa22.84■■□□□ 1.25
CCDC47-204ENST00000582252 PRICKLE1Q96MT3 831 aaPredicted RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms