RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ZBED4O75132 1171 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 CNOT3O75175 753 aaKnown RBP4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 OAZ2O95190 189 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 CDC25AP30304 524 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 CPOXP36551 454 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 CLCN5P51795 746 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 RARSP54136 660 aaKnown RBP4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 KRTAP10-6P60371 365 aaPredicted RBP4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 RUNX2Q13950 521 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 PPP2R5BQ15173 497 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 ITPRIPL1Q6GPH6 555 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 MZT2BQ6NZ67 158 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 NEK10Q6ZWH5 1172 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 SLC46A3Q7Z3Q1 461 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 PCGF5Q86SE9 256 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 TBC1D26Q86UD7 250 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 TMC8Q8IU68 726 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 CADM4Q8NFZ8 388 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 TMEM170AQ8WVE7 144 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 THOC3Q96J01 351 aaKnown RBP4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 LHPPQ9H008 270 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 TMX4Q9H1E5 349 aaPredicted RBP4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 DIAPH3Q9NSV4 1193 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 SEL1LQ9UBV2 794 aa4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 LAS1LQ9Y4W2 734 aaKnown RBP4.93□□□□□ -1.62
SMCHD1-205ENST00000581383 RUSC2Q8N2Y8 1516 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 A0A096LPK6 155 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 TYW5A2RUC4 315 aaKnown RBP4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 CBY3A6NI87 242 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 STMND1H3BQB6 276 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 ATG13O75143 517 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 HEXAP06865 529 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 MAPK4P31152 587 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 CENPAP49450 140 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 GNAQP50148 359 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 CLDN2P57739 230 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 RPL7AP62424 266 aaKnown RBP4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 TMEM115Q12893 351 aaPredicted RBP4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 TWIST1Q15672 202 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 INPP5JQ15735 1006 aaPredicted RBP4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 SNX30Q5VWJ9 437 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 DAB2IPQ5VWQ8 1189 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 ATG9BQ674R7 924 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 CES5AQ6NT32 575 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 CDC73Q6P1J9 531 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 TMEM71Q6P5X7 295 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 CRELD2Q6UXH1 353 aaPredicted RBP4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 PXKQ7Z7A4 578 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 ZDHHC23Q8IYP9 409 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 KDM1BQ8NB78 822 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 CEP76Q8TAP6 659 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 PERPQ96FX8 193 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 ZNF333Q96JL9 665 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 YME1L1Q96TA2 773 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 MAP6D1Q9H9H5 199 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 TERF2IPQ9NYB0 399 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 HEY2Q9UBP5 337 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 MKLN1Q9UL63 735 aa4.92□□□□□ -1.62
SMCHD1-205ENST00000581383 FSD2A1L4K1 749 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 DOK2O60496 412 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 ATP2C2O75185 946 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 TIPRLO75663 272 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 SEC14L2O76054 403 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 SYF2O95926 243 aaKnown RBP4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 PSG1P11464 419 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 PTPN2P17706 415 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 CTPS1P17812 591 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 BDNFP23560 247 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 NFKBIAP25963 317 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 TTKP33981 857 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 PBX3P40426 434 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 GPR12P47775 334 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 ARF3P61204 181 aaPredicted RBP4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 ARF1P84077 181 aaKnown RBP4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 MAMLD1Q13495 774 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 CAPSQ13938 189 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 RNPS1Q15287 305 aaKnown RBP4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 MED22Q15528 200 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 GSTA3Q16772 222 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 NUGGCQ68CJ6 796 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 TXNDC8Q6A555 127 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 CPLX2Q6PUV4 134 aaKnown RBP4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 TDRPQ86YL5 185 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 CAMK1DQ8IU85 385 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 ADSSL1Q8N142 457 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 ARFGAP1Q8N6T3 406 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 ZMIZ2Q8NF64 920 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 INTS12Q96CB8 462 aaKnown RBP4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 RNF183Q96D59 192 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 ZFYVE19Q96K21 471 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 H2AFJQ9BTM1 129 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 TRMOQ9BU70 441 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 ITPAQ9BY32 194 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 SPATS2LQ9NUQ6 558 aaKnown RBP4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 FBXO2Q9UK22 296 aaPredicted RBP4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 INTS6Q9UL03 887 aaKnown RBP4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 PCDHA12Q9UN75 941 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 A4GNTQ9UNA3 340 aa4.91□□□□□ -1.62
SMCHD1-205ENST00000581383 KCNE2Q9Y6J6 123 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms