RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 SLC46A1Q96NT5 459 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 IL12RB2Q99665 862 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 BOCQ9BWV1 1114 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 TTYH3Q9C0H2 523 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 GANQ9H2C0 597 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 CPNE5Q9HCH3 593 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 ASCL3Q9NQ33 180 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 SPASTQ9UBP0 616 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 DKK3Q9UBP4 350 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 GGT7Q9UJ14 662 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 MFHAS1Q9Y4C4 1052 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 MGAQ8IWI9 3026 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 CFAP46Q8IYW2 2715 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 RP1P56715 2156 aa10.75□□□□□ -0.69
RFFL-209ENST00000581265 A0A1W2PNU3 283 aaPredicted RBP10.74□□□□□ -0.69
RFFL-209ENST00000581265 LMO7DNF2Z398 122 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 BUB1O43683 1085 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 GCATO75600 419 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 TCEA3O75764 348 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 TM7SF2O76062 418 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 GFPT2O94808 682 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 KRT3P12035 628 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 UNGP13051 313 aaPredicted RBP10.74□□□□□ -0.69
RFFL-209ENST00000581265 TIMP2P16035 220 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 RFC1P35251 1148 aaPredicted RBP10.74□□□□□ -0.69
RFFL-209ENST00000581265 SOX5P35711 763 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 RPIAP49247 311 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 THOP1P52888 689 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 GSCP56915 257 aaPredicted RBP10.74□□□□□ -0.69
RFFL-209ENST00000581265 JAM2P57087 298 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 YBEYP58557 167 aaPredicted RBP10.74□□□□□ -0.69
RFFL-209ENST00000581265 RAD51Q06609 339 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 DEFB133Q30KQ1 61 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 GUSBP11Q6P575 273 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 GDPD4Q6W3E5 623 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 EFL1Q7Z2Z2 1120 aaKnown RBP10.74□□□□□ -0.69
RFFL-209ENST00000581265 PHLDB2Q86SQ0 1253 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 CCDC185Q8N715 623 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 SLC30A5Q8TAD4 765 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 SNRNP27Q8WVK2 155 aaKnown RBP10.74□□□□□ -0.69
RFFL-209ENST00000581265 TBC1D31Q96DN5 1066 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 GDAP1L1Q96MZ0 367 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 C11orf70Q9BRQ4 267 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 CPEB1Q9BZB8 566 aaKnown RBP10.74□□□□□ -0.69
RFFL-209ENST00000581265 DPH1Q9BZG8 443 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 TRIM4Q9C037 500 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 NOL6Q9H6R4 1146 aaKnown RBP10.74□□□□□ -0.69
RFFL-209ENST00000581265 THSD1Q9NS62 852 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 ITM2BQ9Y287 266 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 DAAM1Q9Y4D1 1078 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 PCDHGA8Q9Y5G5 932 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 ENTPD2Q9Y5L3 495 aa10.74□□□□□ -0.69
RFFL-209ENST00000581265 COL6A6A6NMZ7 2263 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 SIGLEC16A6NMB1 481 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 YY2O15391 372 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 MMP20O60882 483 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 TMCC1O94876 653 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 RBMS1P29558 406 aaKnown RBP10.73□□□□□ -0.69
RFFL-209ENST00000581265 EIF4A3P38919 411 aaKnown RBP10.73□□□□□ -0.69
RFFL-209ENST00000581265 PEX5P50542 639 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 SUOXP51687 545 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 ADKP55263 362 aaKnown RBP10.73□□□□□ -0.69
RFFL-209ENST00000581265 POLR2FP61218 127 aaKnown RBP10.73□□□□□ -0.69
RFFL-209ENST00000581265 SKOR1P84550 965 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 NR0B2Q15466 257 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 PRRT3Q5FWE3 981 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 C6orf132Q5T0Z8 1188 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 ATXN7L2Q5T6C5 722 aaPredicted RBP10.73□□□□□ -0.69
RFFL-209ENST00000581265 WDR59Q6PJI9 974 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 LEKR1Q6ZMV7 388 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 RBM44Q6ZP01 1051 aaKnown RBP10.73□□□□□ -0.69
RFFL-209ENST00000581265 SLFN11Q7Z7L1 901 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 VPS36Q86VN1 386 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 PHF13Q86YI8 300 aaPredicted RBP10.73□□□□□ -0.69
RFFL-209ENST00000581265 SLC35F3Q8IY50 421 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 PHACTR4Q8IZ21 702 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 RBFAQ8N0V3 343 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 RTL3Q8N8U3 475 aaKnown RBP10.73□□□□□ -0.69
RFFL-209ENST00000581265 WDR48Q8TAF3 677 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 ENOX1Q8TC92 643 aaKnown RBP10.73□□□□□ -0.69
RFFL-209ENST00000581265 HCAR2Q8TDS4 363 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 FAM172AQ8WUF8 416 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 KCNE4Q8WWG9 221 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 GLMNQ92990 594 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 NAT6Q93015 286 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 ATXN7L3BQ96GX2 97 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 PRR11Q96HE9 360 aaPredicted RBP10.73□□□□□ -0.69
RFFL-209ENST00000581265 PCDHB18PQ96TA0 734 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 LRRC61Q9BV99 259 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 C1QTNF7Q9BXJ2 289 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 SLC13A1Q9BZW2 595 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 CLPBQ9H078 707 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 VPS16Q9H269 839 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 TCEAL2Q9H3H9 227 aaPredicted RBP10.73□□□□□ -0.69
RFFL-209ENST00000581265 MBNL1Q9NR56 388 aaKnown RBP10.73□□□□□ -0.69
RFFL-209ENST00000581265 FAM207AQ9NSI2 230 aaPredicted RBP10.73□□□□□ -0.69
RFFL-209ENST00000581265 TAB2Q9NYJ8 693 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 ADAM22Q9P0K1 906 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 APOBEC3BQ9UH17 382 aaKnown RBP10.73□□□□□ -0.69
RFFL-209ENST00000581265 PNMA8BQ9ULN7 279 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms