RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 CD101Q93033 1021 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 CYP2S1Q96SQ9 504 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 HNRNPABQ99729 332 aaKnown RBP6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 ACO2Q99798 780 aaKnown RBP6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 ADPGKQ9BRR6 497 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 GTPBP2Q9BX10 602 aaKnown RBP6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 AGXT2Q9BYV1 514 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 C22orf23Q9BZE7 217 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 TRIM8Q9BZR9 551 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 PCED1AQ9H1Q7 454 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 CDT1Q9H211 546 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 TDP1Q9NUW8 608 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 MOCS1Q9NZB8 636 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 TRPM5Q9NZQ8 1165 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 MMP17Q9ULZ9 603 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 TNFSF13BQ9Y275 285 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 ASB3Q9Y575 518 aa6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 COL5A1P20908 1838 aaPredicted RBP6.82□□□□□ -1.32
PPP4R1-216ENST00000580283 ALG1L2C9J202 215 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 PYCARD-AS1I3L0S3 204 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 SGK1O00141 431 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 PPEF2O14830 753 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 PJA2O43164 708 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 MT-CO1P00395 513 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 SLPIP03973 132 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 CFIP05156 583 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 RAP2AP10114 183 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 RBP3P10745 1247 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 XRCC6P12956 609 aaKnown RBP eCLIP6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 PROZP22891 400 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 RDXP35241 583 aaKnown RBP6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 AARSP49588 968 aaKnown RBP eCLIP6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 CDKN1CP49918 316 aaPredicted RBP6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 HMGA2P52926 109 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 EVCP57679 992 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 CLRN1P58418 232 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 ZXDBP98169 803 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 AMPD3Q01432 767 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 YWHAHQ04917 246 aaPredicted RBP6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 SRSF1Q07955 248 aaKnown RBP eCLIP6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 PPP3CAQ08209 521 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 MGAT2Q10469 447 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 SP140Q13342 867 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 ZBTB6Q15916 424 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 DUOXA1Q1HG43 343 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 NEK8Q86SG6 692 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 GLRX5Q86SX6 157 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 ZBTB8OSQ8IWT0 167 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 FBXL16Q8N461 479 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 PPM1NQ8N819 430 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 STKLD1Q8NE28 680 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 APPL2Q8NEU8 664 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 ZBTB45Q96K62 511 aaPredicted RBP6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 ZDHHC4Q9NPG8 344 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 TMEM140Q9NV12 185 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 TUBGCP4Q9UGJ1 667 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 TRHDEQ9UKU6 1024 aa6.81□□□□□ -1.32
PPP4R1-216ENST00000580283 TEP1Q99973 2627 aaKnown RBP6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 RELNP78509 3460 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 CXorf49A8MYA2 514 aaPredicted RBP6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 J3QKU1 62 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 MED24O75448 989 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 FGF19O95750 216 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 ATXN1LP0C7T5 689 aaKnown RBP6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 MYBL2P10244 700 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 NAMPTP43490 491 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 RAP2BP61225 183 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 AKAP17AQ02040 695 aaKnown RBP6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 NHLH2Q02577 135 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 GFPT1Q06210 699 aaPredicted RBP6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 SPAG1Q07617 926 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 PLD1Q13393 1074 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 ZNF77Q15935 545 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 ZC2HC1CQ53FD0 456 aaPredicted RBP6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 ARHGAP15Q53QZ3 475 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 SPDYCQ5MJ68 293 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 ATXN7L2Q5T6C5 722 aaPredicted RBP6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 LYSMD4Q5XG99 296 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 GDF7Q7Z4P5 450 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 CATSPER3Q86XQ3 398 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 NAXDQ8IW45 347 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 HDDC3Q8N4P3 179 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 ALLCQ8N6M5 410 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 IL17RCQ8NAC3 791 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 C1orf162Q8NEQ5 155 aaPredicted RBP6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 OR10T2Q8NGX3 314 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 SLC35B2Q8TB61 432 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 OSCP1Q8WVF1 389 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 KRTAP4-5Q9BYR2 181 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 C2orf40Q9H1Z8 148 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 LDAHQ9H6V9 325 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 SLC38A7Q9NVC3 462 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 GPRC5BQ9NZH0 403 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 ING1Q9UK53 422 aaPredicted RBP6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 PCDHA12Q9UN75 941 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 MRFAP1Q9Y605 127 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 WNT6Q9Y6F9 365 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 NUMA1Q14980 2115 aa6.8□□□□□ -1.32
PPP4R1-216ENST00000580283 DOPEY2Q9Y3R5 2298 aa6.79□□□□□ -1.32
PPP4R1-216ENST00000580283 FAM149AA5PLN7 773 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms