RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 CCDC33Q8N5R6 958 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 CNTD1Q8N815 330 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 EIF1ADQ8N9N8 165 aaKnown RBP8.14□□□□□ -1.11
COPS3-215ENST00000578317 LRRN4CLQ8ND94 238 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 NANOS1Q8WY41 292 aaKnown RBP8.14□□□□□ -1.11
COPS3-215ENST00000578317 RUBCNQ92622 972 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 ISG20Q96AZ6 181 aaKnown RBP8.14□□□□□ -1.11
COPS3-215ENST00000578317 CCDC114Q96M63 670 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 PPP1R2P1Q96PQ5 205 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 PNKPQ96T60 521 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 RAB17Q9H0T7 212 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 C10orf88Q9H8K7 445 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 LIN7BQ9HAP6 207 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 SP110Q9HB58 689 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 ELOVL2Q9NXB9 296 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 PAK5Q9P286 719 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 UBA2Q9UBT2 640 aaPredicted RBP8.14□□□□□ -1.11
COPS3-215ENST00000578317 VPS51Q9UID3 782 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 ATP8A1Q9Y2Q0 1164 aa8.14□□□□□ -1.11
COPS3-215ENST00000578317 UTP11Q9Y3A2 253 aaKnown RBP8.14□□□□□ -1.11
COPS3-215ENST00000578317 C2orf16Q68DN1 1984 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 TMEM238LA0A1B0GVL6 79 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 RNF103O00237 685 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 CBX4O00257 560 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 NDC80O14777 642 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 NPC1O15118 1278 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 TRIM24O15164 1050 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 CTIFO43310 598 aaKnown RBP8.13□□□□□ -1.11
COPS3-215ENST00000578317 SNAP91O60641 907 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 IFNB1P01574 187 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 KRT14P02533 472 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 SRPRAP08240 638 aaKnown RBP8.13□□□□□ -1.11
COPS3-215ENST00000578317 DLDP09622 509 aaKnown RBP8.13□□□□□ -1.11
COPS3-215ENST00000578317 ITIH2P19823 946 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 RPL22P35268 128 aaKnown RBP8.13□□□□□ -1.11
COPS3-215ENST00000578317 SOX18P35713 384 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 MAGEA6P43360 314 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 TNFRSF4P43489 277 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 CSNK1DP48730 415 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 SLC10A7Q0GE19 358 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 PPP1R7Q15435 360 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 CYTH1Q15438 398 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 GEN1Q17RS7 908 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 FUT11Q495W5 492 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 RALGPS1Q5JS13 557 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 TMEM215Q68D42 235 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 B4GALNT4Q76KP1 1039 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 PID1Q7Z2X4 250 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 RELL1Q8IUW5 271 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 BBS5Q8N3I7 341 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 GPR161Q8N6U8 529 aaKnown RBP8.13□□□□□ -1.11
COPS3-215ENST00000578317 TERB1Q8NA31 727 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 GLIS1Q8NBF1 620 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 MYRIPQ8NFW9 859 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 GTPBP3Q969Y2 492 aaKnown RBP8.13□□□□□ -1.11
COPS3-215ENST00000578317 LRRC45Q96CN5 670 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 ASB2Q96Q27 587 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 FAM129AQ9BZQ8 928 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 CEP44Q9C0F1 390 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 RBM22Q9NW64 420 aaKnown RBP eCLIP8.13□□□□□ -1.11
COPS3-215ENST00000578317 ZFATQ9P243 1243 aa8.13□□□□□ -1.11
COPS3-215ENST00000578317 DOCK8Q8NF50 2099 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 PRRT4C9JH25 899 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 SPECC1L-ADORA2AF8WAN1 911 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 MT-CO1P00395 513 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 ASGR2P07307 311 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 ZSCAN5DPP0CG00 497 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 ETS1P14921 441 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 CR2P20023 1033 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 GLDCP23378 1020 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 CD68P34810 354 aaPredicted RBP8.12□□□□□ -1.11
COPS3-215ENST00000578317 FDFT1P37268 417 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 ADCY8P40145 1251 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 NNMTP40261 264 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 MMP13P45452 471 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 SERPINH1P50454 418 aaKnown RBP8.12□□□□□ -1.11
COPS3-215ENST00000578317 GALK1P51570 392 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 TERF1P54274 439 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 CDK16Q00536 496 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 TNP2Q05952 138 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 ZBTB17Q13105 803 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 SLC44A4Q53GD3 710 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 MBLAC2Q68D91 279 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 ITPRIPL1Q6GPH6 555 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 PCGF5Q86SE9 256 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 ZNF354CQ86Y25 554 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 IFT20Q8IY31 132 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 VWA5B2Q8N398 1253 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 SH2D3CQ8N5H7 860 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 BBOF1Q8ND07 529 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 CCDC110Q8TBZ0 833 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.12□□□□□ -1.11
COPS3-215ENST00000578317 TADA1Q96BN2 335 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 ZNF419Q96HQ0 510 aaPredicted RBP8.12□□□□□ -1.11
COPS3-215ENST00000578317 MRGPRX3Q96LB0 322 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 FCRL5Q96RD9 977 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 MGME1Q9BQP7 344 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 SLC25A51Q9H1U9 297 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 ZFYVE1Q9HBF4 777 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 GLOD4Q9HC38 313 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms