RNA–Protein interactions for RNA: ENST00000577681.1

CCL13-202, Transcript of C-C motif chemokine ligand 13, humanhuman

TSL 1 (best)

Gene CCL13, Length 669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-202ENST00000577681 INSIG1O15503 277 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 SLC7A4O43246 635 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 FZD6O60353 706 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 RNASEH1O60930 286 aaKnown RBP8.09□□□□□ -1.11
CCL13-202ENST00000577681 PHF2O75151 1096 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 ALDH1A2O94788 518 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 STK10O94804 968 aaKnown RBP8.09□□□□□ -1.11
CCL13-202ENST00000577681 MAP3K6O95382 1288 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 ADH1BP00325 375 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 JCHAINP01591 159 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 HLA-DQB2P05538 268 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 MMP2P08253 660 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 GABRG2P18507 467 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 C5AR1P21730 350 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 CHRNA3P32297 505 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 CD68P34810 354 aaPredicted RBP8.09□□□□□ -1.11
CCL13-202ENST00000577681 RECQLP46063 649 aaPredicted RBP8.09□□□□□ -1.11
CCL13-202ENST00000577681 RGRP47804 291 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 ATP5OP48047 213 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 DNA2P51530 1060 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 NRLP54845 237 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 RPL26P61254 145 aaKnown RBP8.09□□□□□ -1.11
CCL13-202ENST00000577681 RHOAP61586 193 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 RPS14P62263 151 aaKnown RBP8.09□□□□□ -1.11
CCL13-202ENST00000577681 SATB1Q01826 763 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 RAD51Q06609 339 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 AP1B1Q10567 949 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 ZNF235Q14590 738 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 LLGL1Q15334 1064 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 WHAMMP3Q1A5X7 153 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 FAM46CQ5VWP2 391 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 ZNF776Q68DI1 518 aaPredicted RBP8.09□□□□□ -1.11
CCL13-202ENST00000577681 DARS2Q6PI48 645 aaKnown RBP8.09□□□□□ -1.11
CCL13-202ENST00000577681 Q6ZVU0 165 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 KBTBD6Q86V97 674 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 ZNF354CQ86Y25 554 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 RAVER1Q8IY67 606 aaKnown RBP8.09□□□□□ -1.11
CCL13-202ENST00000577681 ZNF567Q8N184 647 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 CCDC33Q8N5R6 958 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 NETO2Q8NC67 525 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 HDAC8Q9BY41 377 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 MKRN2Q9H000 416 aaKnown RBP8.09□□□□□ -1.11
CCL13-202ENST00000577681 KDM4CQ9H3R0 1056 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 SEMA4AQ9H3S1 761 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 GLOD4Q9HC38 313 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 C2orf42Q9NWW7 574 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 HECAQ9UBI9 543 aaPredicted RBP8.09□□□□□ -1.11
CCL13-202ENST00000577681 IL36AQ9UHA7 158 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 FZD4Q9ULV1 537 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 RPL26L1Q9UNX3 145 aaKnown RBP8.09□□□□□ -1.11
CCL13-202ENST00000577681 CEP192Q8TEP8 1941 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 LOC285095A0A1B0GVY8 99 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 ERI2A8K979 691 aaKnown RBP8.08□□□□□ -1.12
CCL13-202ENST00000577681 C1QTNF3-AMACRE9PGA6 284 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 KRIT1O00522 736 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 ZBTB24O43167 697 aaPredicted RBP8.08□□□□□ -1.12
CCL13-202ENST00000577681 LAMTOR5O43504 91 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 AP1G1O43747 822 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 ZNF217O75362 1048 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 CTSLP07711 333 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 SERPINF2P08697 491 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 HLA-EP13747 358 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 ITGB7P26010 798 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 CNR2P34972 360 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 DRD3P35462 400 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 COILP38432 576 aaPredicted RBP8.08□□□□□ -1.12
CCL13-202ENST00000577681 MAGEA6P43360 314 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 CKAP4Q07065 602 aaKnown RBP8.08□□□□□ -1.12
CCL13-202ENST00000577681 NIPAL4Q0D2K0 466 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 CCDC15Q0P6D6 951 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 CBLBQ13191 982 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 IHHQ14623 411 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 CST6Q15828 149 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 PARP6Q2NL67 630 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 ACCSLQ4AC99 568 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 ZNF805Q5CZA5 627 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 SPDYCQ5MJ68 293 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 ANKRD20A2Q5SQ80 823 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 ANKRD20A1Q5TYW2 823 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 ANKRD20A3Q5VUR7 823 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 ARMC3Q5W041 872 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 ITPRIPL1Q6GPH6 555 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 TTC27Q6P3X3 843 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 BRAT1Q6PJG6 821 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 GDPD4Q6W3E5 623 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 SYDE1Q6ZW31 735 aaPredicted RBP8.08□□□□□ -1.12
CCL13-202ENST00000577681 PRPF39Q86UA1 669 aaKnown RBP8.08□□□□□ -1.12
CCL13-202ENST00000577681 WDR5BQ86VZ2 330 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 TMPRSS6Q8IU80 811 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 STK40Q8N2I9 435 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 CHST14Q8NCH0 376 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 SPATA4Q8NEY3 305 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 TSTD1Q8NFU3 115 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 GRK7Q8WTQ7 553 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 C1orf54Q8WWF1 131 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 ATG4AQ8WYN0 398 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 MAGOHBQ96A72 148 aaKnown RBP8.08□□□□□ -1.12
CCL13-202ENST00000577681 RAB7BQ96AH8 199 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 NSMCE3Q96MG7 304 aa8.08□□□□□ -1.12
CCL13-202ENST00000577681 SEMA3CQ99985 751 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms