RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 ZBTB17Q13105 803 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PTK6Q13882 451 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PON2Q15165 354 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 DGKKQ5KSL6 1271 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 BBS5Q8N3I7 341 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PGBD5Q8N414 524 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CCDC89Q8N998 374 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 FAM71DQ8N9W8 422 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ARRDC2Q8TBH0 407 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 FCRL5Q96RD9 977 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 KRT12Q99456 494 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 GABRG3Q99928 467 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CPEB1Q9BZB8 566 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SLC25A51Q9H1U9 297 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 C10orf88Q9H8K7 445 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PAK5Q9P286 719 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 LHX3Q9UBR4 397 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SUN2Q9UH99 717 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SLC25A13Q9UJS0 675 aa11.29□□□□□ -0.6
CDK5RAP3-204ENST00000577664 EFCAB8A8MWE9 144 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CHURC1-FNTBB4DL54 471 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 K7ERQ8 282 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 K7ESF4 209 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SGK1O00141 431 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 TK2O00142 265 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 RNF103O00237 685 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 MUSKO15146 869 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ZBTB24O43167 697 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SMAD6O43541 496 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 STK10O94804 968 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 TMCC1O94876 653 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SLU7O95391 586 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 GSRP00390 522 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 EGFP01133 1207 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 EPOP01588 193 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 RPL22P35268 128 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 FNTBP49356 437 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 DR1Q01658 176 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SATB1Q01826 763 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 C2orf54Q08AI8 447 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ZNF234Q14588 700 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 GRM3Q14832 879 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 DLG2Q15700 870 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 HNRNPA1L2Q32P51 320 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PID1Q7Z2X4 250 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 TRMT11Q7Z4G4 463 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 JAMLQ86YT9 394 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SFTPA1Q8IWL2 248 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CCDC33Q8N5R6 958 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ATP11CQ8NB49 1132 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 GLIS1Q8NBF1 620 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 NOA1Q8NC60 698 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 TSEN2Q8NCE0 465 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 HCAR2Q8TDS4 363 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 USP33Q8TEY7 942 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 PTPRN2Q92932 1015 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 IMP4Q96G21 291 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 LRIG1Q96JA1 1093 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 RPL10LQ96L21 214 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 NUDCD1Q96RS6 583 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ERP44Q9BS26 406 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 LRRC1Q9BTT6 524 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CIPCQ9C0C6 399 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 POLR1EQ9GZS1 481 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 GLOD4Q9HC38 313 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CD248Q9HCU0 757 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 VPS45Q9NRW7 570 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 SLC8A2Q9UPR5 921 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ACTL7AQ9Y615 435 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 ZNF462Q96JM2 2506 aa11.28□□□□□ -0.6
CDK5RAP3-204ENST00000577664 CFAP46Q8IYW2 2715 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 MUC22E2RYF6 1773 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ERI2A8K979 691 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SMAPO00193 183 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 AXIN1O15169 862 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ALOX15BO15296 676 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PSMD3O43242 534 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 RAD51CO43502 376 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 C1QL1O75973 258 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 POP4O95707 220 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 KRT14P02533 472 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 HLA-DQB2P05538 268 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 MMP2P08253 660 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ACTN2P35609 894 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 FDFT1P37268 417 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 MAPK8P45983 427 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 STK19P49842 368 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ST8SIA6P61647 398 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SNRPD1P62314 119 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CDK16Q00536 496 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 KDSRQ06136 332 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CAMK2GQ13555 558 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SEMA5AQ13591 1074 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CARD16Q5EG05 197 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 C9orf64Q5T6V5 341 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 DUPD1Q68J44 220 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 KCTD11Q693B1 232 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ITPRIPL1Q6GPH6 555 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 LINGO4Q6UY18 593 aa11.27□□□□□ -0.61
CDK5RAP3-204ENST00000577664 B4GALNT4Q76KP1 1039 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms