RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 MAP7D2Q96T17 732 aa2.66□□□□□ -1.98
COPS3-213ENST00000577210 NCAPGQ9BPX3 1015 aa2.66□□□□□ -1.98
COPS3-213ENST00000577210 TREX2Q9BQ50 279 aaPredicted RBP2.66□□□□□ -1.98
COPS3-213ENST00000577210 CLSTN3Q9BQT9 956 aa2.66□□□□□ -1.98
COPS3-213ENST00000577210 AGXT2Q9BYV1 514 aa2.66□□□□□ -1.98
COPS3-213ENST00000577210 RBM38Q9H0Z9 239 aaKnown RBP2.66□□□□□ -1.98
COPS3-213ENST00000577210 ISCUQ9H1K1 167 aa2.66□□□□□ -1.98
COPS3-213ENST00000577210 FOXP1Q9H334 677 aaPredicted RBP2.66□□□□□ -1.98
COPS3-213ENST00000577210 SMYD2Q9NRG4 433 aa2.66□□□□□ -1.98
COPS3-213ENST00000577210 SIRT3Q9NTG7 399 aaPredicted RBP2.66□□□□□ -1.98
COPS3-213ENST00000577210 EHD2Q9NZN4 543 aa2.66□□□□□ -1.98
COPS3-213ENST00000577210 A4GNTQ9UNA3 340 aa2.66□□□□□ -1.98
COPS3-213ENST00000577210 COG5Q9UP83 839 aa2.66□□□□□ -1.98
COPS3-213ENST00000577210 FAM96BQ9Y3D0 163 aa2.66□□□□□ -1.98
COPS3-213ENST00000577210 ZNF521Q96K83 1311 aa2.66□□□□□ -1.98
COPS3-213ENST00000577210 A0A0G2JK05 382 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 TMEM272A0A1B0GTI8 110 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 TARSL2A2RTX5 802 aaKnown RBP2.65□□□□□ -1.99
COPS3-213ENST00000577210 PABPN1LA6NDY0 278 aaKnown RBP2.65□□□□□ -1.99
COPS3-213ENST00000577210 OR6C75A6NL08 312 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 C17orf100A8MU93 164 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 H3BNX3 289 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 ZBED4O75132 1171 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 CLEC3BP05452 202 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 TFPIP10646 304 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 CHRNB1P11230 501 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 EPHA8P29322 1005 aaPredicted RBP2.65□□□□□ -1.99
COPS3-213ENST00000577210 HOXD3P31249 432 aaPredicted RBP2.65□□□□□ -1.99
COPS3-213ENST00000577210 GGT5P36269 586 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 NR4A2P43354 598 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 RFX2P48378 723 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 CCT4P50991 539 aaKnown RBP2.65□□□□□ -1.99
COPS3-213ENST00000577210 EIF5P55010 431 aaKnown RBP2.65□□□□□ -1.99
COPS3-213ENST00000577210 HDAC4P56524 1084 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 ARF3P61204 181 aaPredicted RBP2.65□□□□□ -1.99
COPS3-213ENST00000577210 ARF1P84077 181 aaKnown RBP2.65□□□□□ -1.99
COPS3-213ENST00000577210 ADORA2A-AS1P86434 159 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 ZBED6P86452 979 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 SLC18A2Q05940 514 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 MAMLD1Q13495 774 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 OLIG2Q13516 323 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 GPR18Q14330 331 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 PPP2R5BQ15173 497 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 ETFDHQ16134 617 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 DUSP6Q16828 381 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 FSCBQ5H9T9 825 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 EPHA10Q5JZY3 1008 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 WASHC2DQ5SRD0 308 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 SLC9C2Q5TAH2 1124 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 FAM180BQ6P0A1 224 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 TMEM154Q6P9G4 183 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 SARM1Q6SZW1 724 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 TRILQ7L0X0 811 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 SLC46A3Q7Z3Q1 461 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 R3HCC1LQ7Z5L2 792 aaKnown RBP2.65□□□□□ -1.99
COPS3-213ENST00000577210 C1QL2Q7Z5L3 287 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 PCGF5Q86SE9 256 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 PIP4P1Q86T03 277 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 GPAT4Q86UL3 456 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 HACE1Q8IYU2 909 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 ZCCHC9Q8N567 271 aaKnown RBP2.65□□□□□ -1.99
COPS3-213ENST00000577210 CCDC89Q8N998 374 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 SCCPDHQ8NBX0 429 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 C7orf57Q8NEG2 295 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 TDRD7Q8NHU6 1098 aaKnown RBP2.65□□□□□ -1.99
COPS3-213ENST00000577210 CEP76Q8TAP6 659 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 MAGEC3Q8TD91 643 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 NSMCE1Q8WV22 266 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 UCMAQ8WVF2 138 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 ATOH1Q92858 354 aaPredicted RBP2.65□□□□□ -1.99
COPS3-213ENST00000577210 SLC25A28Q96A46 364 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 TMEM18Q96B42 140 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 HARBI1Q96MB7 349 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 BBS4Q96RK4 519 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 WDR77Q9BQA1 342 aaPredicted RBP2.65□□□□□ -1.99
COPS3-213ENST00000577210 CXorf56Q9H5V9 222 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 MAP6D1Q9H9H5 199 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 BPIFA1Q9NP55 256 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 ASAH2Q9NR71 780 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 TLR8Q9NR97 1041 aaKnown RBP2.65□□□□□ -1.99
COPS3-213ENST00000577210 SNTG1Q9NSN8 517 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 NLKQ9UBE8 527 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 HDAC6Q9UBN7 1215 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 NDRG3Q9UGV2 375 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 NRBP1Q9UHY1 535 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 HAO1Q9UJM8 370 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 FZD10Q9ULW2 581 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 AAR2Q9Y312 384 aaKnown RBP2.65□□□□□ -1.99
COPS3-213ENST00000577210 SQORQ9Y6N5 450 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 SCINQ9Y6U3 715 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 KDM3AQ9Y4C1 1321 aa2.65□□□□□ -1.99
COPS3-213ENST00000577210 ANKRD18BA2A2Z9 1011 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 CBY3A6NI87 242 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 A6NNC1 897 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 B4DGG1 531 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 SCAMP1O15126 338 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 TNFSF14O43557 240 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 SPRY3O43610 288 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 GAGE7O76087 117 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 TFP02787 698 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms