RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 LHX1P48742 406 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 WNT3AP56704 352 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 TAS2R39P59534 338 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 MRPS5P82675 430 aaKnown RBP18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 RNF219Q5W0B1 726 aaPredicted RBP18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 SCARA3Q6AZY7 606 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 ASRGL1Q7L266 308 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 SYTL1Q8IYJ3 562 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 OR8H2Q8N162 312 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 ZNF276Q8N554 614 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 DENND1AQ8TEH3 1009 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 TCF12Q99081 682 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 ZNF556Q9HAH1 456 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 COMMD8Q9NX08 183 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 SELENONQ9NZV5 590 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 ARFGEF2Q9Y6D5 1785 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 A0A0J9YYE9 177 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 NTRK1P04629 796 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 NCK1P16333 377 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 SOAT1P35610 550 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 ZC3H12BQ5HYM0 836 aaKnown RBP18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 MRPL57Q9BQC6 102 aaKnown RBP18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 STN1Q9H668 368 aaKnown RBP18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 TBC1D13Q9NVG8 400 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 DMTF1Q9Y222 760 aa18.03■□□□□ 0.48
ATPAF1-214ENST00000576409 HOXC6P09630 235 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 CCDC159P0C7I6 412 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 ITGAXP20702 1163 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 GPR158Q5T848 1215 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 MAP1SQ66K74 1059 aaPredicted RBP18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 GCNT7Q6ZNI0 430 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 CTU1Q7Z7A3 348 aaKnown RBP18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 ATP6V0D2Q8N8Y2 350 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 CASP10Q92851 521 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 MTF2Q9Y483 593 aaPredicted RBP18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 PCDHB12Q9Y5F1 795 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 SORBS2O94875 1100 aaKnown RBP18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 EGFRP00533 1210 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 TPSB2P20231 275 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 HARS2P49590 506 aaKnown RBP18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 PSMD7P51665 324 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 LIMK2P53671 638 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 NAB1Q13506 487 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 TPSAB1Q15661 275 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 TEX44Q53QW1 395 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 PAOXQ6QHF9 649 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 C2orf69Q8N8R5 385 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 SH3KBP1Q96B97 665 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 TPD52L3Q96J77 140 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 PEBP4Q96S96 227 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 CLPBQ9H078 707 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 KDM3BQ7LBC6 1761 aa18.02■□□□□ 0.48
ATPAF1-214ENST00000576409 C17orf102A2RUQ5 167 aa18.02■□□□□ 0.47
ATPAF1-214ENST00000576409 CYP4B1P13584 511 aa18.02■□□□□ 0.47
ATPAF1-214ENST00000576409 ADSLP30566 484 aaPredicted RBP18.02■□□□□ 0.47
ATPAF1-214ENST00000576409 YAP1P46937 504 aaKnown RBP18.02■□□□□ 0.47
ATPAF1-214ENST00000576409 CCNG1P51959 295 aa18.02■□□□□ 0.47
ATPAF1-214ENST00000576409 RUNX1T1Q06455 604 aa18.02■□□□□ 0.47
ATPAF1-214ENST00000576409 SLC25A52Q3SY17 297 aa18.02■□□□□ 0.47
ATPAF1-214ENST00000576409 RRM2BQ7LG56 351 aa18.02■□□□□ 0.47
ATPAF1-214ENST00000576409 EFL1Q7Z2Z2 1120 aaKnown RBP18.02■□□□□ 0.47
ATPAF1-214ENST00000576409 UNC93AQ86WB7 457 aa18.02■□□□□ 0.47
ATPAF1-214ENST00000576409 ZFYVE28Q9HCC9 887 aa18.02■□□□□ 0.47
ATPAF1-214ENST00000576409 ENTPD7Q9NQZ7 604 aa18.02■□□□□ 0.47
ATPAF1-214ENST00000576409 ABCB10Q9NRK6 738 aa18.02■□□□□ 0.47
ATPAF1-214ENST00000576409 ADAM28Q9UKQ2 775 aa18.02■□□□□ 0.47
ATPAF1-214ENST00000576409 TMEM247A6NEH6 219 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 TMEM114B3SHH9 223 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 NPM3O75607 178 aaKnown RBP18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 ALOX12P18054 663 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 RAB27AP51159 221 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 SLC5A3P53794 718 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 SLC25A11Q02978 314 aaKnown RBP18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 IL23RQ5VWK5 629 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 SPPL2AQ8TCT8 520 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 SEMA3CQ99985 751 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 VWA7Q9Y334 891 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 MSCO60682 206 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 TBX4P57082 545 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 FKBP1AP62942 108 aaKnown RBP18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 SQLEQ14534 574 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 PTPRNQ16849 979 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 SOWAHAQ2M3V2 549 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 TLDC1Q6P9B6 456 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 NECAB2Q7Z6G3 386 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 VAT1Q99536 393 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 PRKD2Q9BZL6 878 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 REXO4Q9GZR2 422 aaKnown RBP18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 PLGRKTQ9HBL7 147 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 PRKAA2P54646 552 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 ABRAXAS1Q6UWZ7 409 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 OR9I1Q8NGQ6 314 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 PTCD3Q96EY7 689 aaKnown RBP18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 GPR20Q99678 358 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 KLQ9UEF7 1012 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 LMO7Q8WWI1 1683 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 F5H5T6 163 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 PPEF2O14830 753 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 CLIC3O95833 236 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms