RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 PCDHGA8Q9Y5G5 932 aa10.59□□□□□ -0.71
TVP23B-208ENST00000575261 LMO7DNF2Z398 122 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 TOR1BO14657 336 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 MUSKO15146 869 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 KDELR3O43731 214 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 ANXA6P08133 673 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 PLEKP08567 350 aaPredicted RBP10.58□□□□□ -0.72
TVP23B-208ENST00000575261 NSFP46459 744 aaKnown RBP10.58□□□□□ -0.72
TVP23B-208ENST00000575261 HDAC4P56524 1084 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 GSCP56915 257 aaPredicted RBP10.58□□□□□ -0.72
TVP23B-208ENST00000575261 FMO1Q01740 532 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 CFHR1Q03591 330 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 CT47A1Q5JQC4 288 aaPredicted RBP10.58□□□□□ -0.72
TVP23B-208ENST00000575261 LRRC73Q5JTD7 316 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 ATXN7L2Q5T6C5 722 aaPredicted RBP10.58□□□□□ -0.72
TVP23B-208ENST00000575261 CRTC1Q6UUV9 634 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 PCSK4Q6UW60 755 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 LEKR1Q6ZMV7 388 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 TTC7BQ86TV6 843 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 VPS36Q86VN1 386 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 SLC35F3Q8IY50 421 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 ZNF843Q8N446 348 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 CCDC185Q8N715 623 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 RTL3Q8N8U3 475 aaKnown RBP10.58□□□□□ -0.72
TVP23B-208ENST00000575261 JOSD2Q8TAC2 188 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 CASKIN2Q8WXE0 1202 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 CENPIQ92674 756 aaPredicted RBP10.58□□□□□ -0.72
TVP23B-208ENST00000575261 VOPP1Q96AW1 172 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 CENPTQ96BT3 561 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 CCDC97Q96F63 343 aaPredicted RBP10.58□□□□□ -0.72
TVP23B-208ENST00000575261 ATXN7L3BQ96GX2 97 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 EPAS1Q99814 870 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 TTYH3Q9C0H2 523 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 NUP62CLQ9H1M0 184 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 GANQ9H2C0 597 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 TCEAL2Q9H3H9 227 aaPredicted RBP10.58□□□□□ -0.72
TVP23B-208ENST00000575261 CPNE5Q9HCH3 593 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 SAMSN1Q9NSI8 373 aaKnown RBP10.58□□□□□ -0.72
TVP23B-208ENST00000575261 TAB2Q9NYJ8 693 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 DAAM1Q9Y4D1 1078 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 ENTPD2Q9Y5L3 495 aa10.58□□□□□ -0.72
TVP23B-208ENST00000575261 BUB1O43683 1085 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 GCATO75600 419 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 GJB6O95452 261 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 TPM2P07951 284 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 KRT3P12035 628 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 PLA2G2AP14555 144 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 CHRNB2P17787 502 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 GPD1P21695 349 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 EPHB2P29323 1055 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 SOX5P35711 763 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 MLLT3P42568 568 aaPredicted RBP10.57□□□□□ -0.72
TVP23B-208ENST00000575261 BLKP51451 505 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 ADKP55263 362 aaKnown RBP10.57□□□□□ -0.72
TVP23B-208ENST00000575261 JAM2P57087 298 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 POLR2FP61218 127 aaKnown RBP10.57□□□□□ -0.72
TVP23B-208ENST00000575261 RHOAP61586 193 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 ELP6Q0PNE2 266 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 SPIDRQ14159 915 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 KLHL40Q2TBA0 621 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 INO80DQ53TQ3 878 aaPredicted RBP10.57□□□□□ -0.72
TVP23B-208ENST00000575261 EFHC2Q5JST6 749 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 PERM1Q5SV97 790 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 ARHGAP40Q5TG30 622 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 ESRP1Q6NXG1 681 aaKnown RBP10.57□□□□□ -0.72
TVP23B-208ENST00000575261 SLFN11Q7Z7L1 901 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 PHLDB2Q86SQ0 1253 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 ZNF605Q86T29 641 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 ARL14Q8N4G2 192 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 TP53I13Q8NBR0 393 aaPredicted RBP10.57□□□□□ -0.72
TVP23B-208ENST00000575261 WDR36Q8NI36 951 aaKnown RBP10.57□□□□□ -0.72
TVP23B-208ENST00000575261 SLC30A5Q8TAD4 765 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 WBP1Q96G27 269 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 SLC46A1Q96NT5 459 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 NCAPGQ9BPX3 1015 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 CCDC3Q9BQI4 270 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 SELENOOQ9BVL4 669 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 SYNDIG1Q9H7V2 258 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 FAM207AQ9NSI2 230 aaPredicted RBP10.57□□□□□ -0.72
TVP23B-208ENST00000575261 DKK3Q9UBP4 350 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 DOLKQ9UPQ8 538 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 MFHAS1Q9Y4C4 1052 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 RP1P56715 2156 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 PIEZO2Q9H5I5 2752 aa10.57□□□□□ -0.72
TVP23B-208ENST00000575261 COL6A6A6NMZ7 2263 aa10.56□□□□□ -0.72
TVP23B-208ENST00000575261 A0A1W2PNU3 283 aaPredicted RBP10.56□□□□□ -0.72
TVP23B-208ENST00000575261 CDRT15L2A8MXV6 281 aa10.56□□□□□ -0.72
TVP23B-208ENST00000575261 MMP20O60882 483 aa10.56□□□□□ -0.72
TVP23B-208ENST00000575261 CALB1P05937 261 aa10.56□□□□□ -0.72
TVP23B-208ENST00000575261 ALPIP09923 528 aa10.56□□□□□ -0.72
TVP23B-208ENST00000575261 UNGP13051 313 aaPredicted RBP10.56□□□□□ -0.72
TVP23B-208ENST00000575261 TSHRP16473 764 aa10.56□□□□□ -0.72
TVP23B-208ENST00000575261 XPAP23025 273 aaPredicted RBP10.56□□□□□ -0.72
TVP23B-208ENST00000575261 RFC1P35251 1148 aaPredicted RBP10.56□□□□□ -0.72
TVP23B-208ENST00000575261 EIF4A3P38919 411 aaKnown RBP10.56□□□□□ -0.72
TVP23B-208ENST00000575261 KLK7P49862 253 aa10.56□□□□□ -0.72
TVP23B-208ENST00000575261 PEX5P50542 639 aa10.56□□□□□ -0.72
TVP23B-208ENST00000575261 SUOXP51687 545 aa10.56□□□□□ -0.72
TVP23B-208ENST00000575261 YBEYP58557 167 aaPredicted RBP10.56□□□□□ -0.72
TVP23B-208ENST00000575261 SKOR1P84550 965 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms