RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 TDGF1P13385 188 aa17.26■□□□□ 0.35
NUP88-210ENST00000574867 SKOR1P84550 965 aa17.26■□□□□ 0.35
NUP88-210ENST00000574867 CCDC15Q0P6D6 951 aa17.26■□□□□ 0.35
NUP88-210ENST00000574867 PRPSAP1Q14558 356 aa17.26■□□□□ 0.35
NUP88-210ENST00000574867 CFAP58Q5T655 872 aa17.26■□□□□ 0.35
NUP88-210ENST00000574867 BRAT1Q6PJG6 821 aa17.26■□□□□ 0.35
NUP88-210ENST00000574867 USP30Q70CQ3 517 aa17.26■□□□□ 0.35
NUP88-210ENST00000574867 KBTBD6Q86V97 674 aa17.26■□□□□ 0.35
NUP88-210ENST00000574867 MAML2Q8IZL2 1156 aaPredicted RBP17.26■□□□□ 0.35
NUP88-210ENST00000574867 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.26■□□□□ 0.35
NUP88-210ENST00000574867 SPOCK2Q92563 424 aa17.26■□□□□ 0.35
NUP88-210ENST00000574867 TADA1Q96BN2 335 aa17.26■□□□□ 0.35
NUP88-210ENST00000574867 FAM126AQ9BYI3 521 aaPredicted RBP17.26■□□□□ 0.35
NUP88-210ENST00000574867 SUV39H2Q9H5I1 410 aa17.26■□□□□ 0.35
NUP88-210ENST00000574867 USP36Q9P275 1121 aaKnown RBP17.26■□□□□ 0.35
NUP88-210ENST00000574867 DKK3Q9UBP4 350 aa17.26■□□□□ 0.35
NUP88-210ENST00000574867 TSPAN11A1L157 253 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 CSTF1Q05048 431 aaKnown RBP17.25■□□□□ 0.35
NUP88-210ENST00000574867 PARP6Q2NL67 630 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 DNTTIP2Q5QJE6 756 aaKnown RBP17.25■□□□□ 0.35
NUP88-210ENST00000574867 PRPF39Q86UA1 669 aaKnown RBP17.25■□□□□ 0.35
NUP88-210ENST00000574867 CAMK1DQ8IU85 385 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 MNS1Q8NEH6 495 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 ECHDC3Q96DC8 303 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 KLHL32Q96NJ5 620 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 RBM15Q96T37 977 aaKnown RBP eCLIP17.25■□□□□ 0.357e-12■■□□□ 12.2
NUP88-210ENST00000574867 LRFN3Q9BTN0 628 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 TDRD1Q9BXT4 1180 aaKnown RBP17.25■□□□□ 0.35
NUP88-210ENST00000574867 FAM153AQ9UHL3 310 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 FZD4Q9ULV1 537 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 AAR2Q9Y312 384 aaKnown RBP17.25■□□□□ 0.35
NUP88-210ENST00000574867 CACNA1IQ9P0X4 2223 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 GOLGA6CA6NDK9 693 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 GOLGA6BA6NDN3 693 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 TRAFD1O14545 582 aaPredicted RBP17.25■□□□□ 0.35
NUP88-210ENST00000574867 AXIN1O15169 862 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 HTRA2O43464 458 aaPredicted RBP17.25■□□□□ 0.35
NUP88-210ENST00000574867 IGLV3-19P01714 112 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 GOLGA6DP0CG33 693 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 PSMB4P28070 264 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 TRAF2Q12933 501 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 MPP3Q13368 585 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 ZNF528Q3MIS6 628 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 KLHL7Q8IXQ5 586 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 HDAC8Q9BY41 377 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 GOLGA6AQ9NYA3 693 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 NCKAP1Q9Y2A7 1128 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 PCDHGC4Q9Y5F7 938 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 RAI2Q9Y5P3 530 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 ZNF318Q5VUA4 2279 aa17.25■□□□□ 0.35
NUP88-210ENST00000574867 PLXND1Q9Y4D7 1925 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 SLC7A4O43246 635 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 GALR2O43603 387 aaPredicted RBP17.24■□□□□ 0.35
NUP88-210ENST00000574867 DRD3P35462 400 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 FDFT1P37268 417 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 NEK3P51956 506 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 GEMP55040 296 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 DHX34Q14147 1143 aaKnown RBP17.24■□□□□ 0.35
NUP88-210ENST00000574867 ANGPT1Q15389 498 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 TSSK4Q6SA08 328 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 ERN2Q76MJ5 926 aaKnown RBP17.24■□□□□ 0.35
NUP88-210ENST00000574867 AADATQ8N5Z0 425 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 PAF1Q8N7H5 531 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 SPATA22Q8NHS9 363 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 CCHCR1Q8TD31 782 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 FAM131CQ96AQ9 280 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 ARRDC3Q96B67 414 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 LRRC45Q96CN5 670 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 NSMCE3Q96MG7 304 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 OMDQ99983 421 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 TPSD1Q9BZJ3 242 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 ITM2CQ9NQX7 267 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 FBXL12Q9NXK8 326 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 ARIH1Q9Y4X5 557 aaPredicted RBP17.24■□□□□ 0.35
NUP88-210ENST00000574867 C16orf96A6NNT2 1141 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 RNASEH2AO75792 299 aaKnown RBP17.24■□□□□ 0.35
NUP88-210ENST00000574867 MT-CYBP00156 380 aaPredicted RBP17.24■□□□□ 0.35
NUP88-210ENST00000574867 PXNP49023 591 aaPredicted RBP17.24■□□□□ 0.35
NUP88-210ENST00000574867 TPMTP51580 245 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 SUOXP51687 545 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 METAP1P53582 386 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 RPL26P61254 145 aaKnown RBP17.24■□□□□ 0.35
NUP88-210ENST00000574867 POLR2LP62875 67 aaKnown RBP17.24■□□□□ 0.35
NUP88-210ENST00000574867 POM121L1PQ3SYA9 428 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 FAM182AQ5T1J6 154 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 ARMC12Q5T9G4 340 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 SYDE1Q6ZW31 735 aaPredicted RBP17.24■□□□□ 0.35
NUP88-210ENST00000574867 PARS2Q7L3T8 475 aaKnown RBP17.24■□□□□ 0.35
NUP88-210ENST00000574867 WDR5BQ86VZ2 330 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 LONP2Q86WA8 852 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 HDDC3Q8N4P3 179 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 GLIS1Q8NBF1 620 aa17.24■□□□□ 0.35
NUP88-210ENST00000574867 OXNAD1Q96HP4 312 aaPredicted RBP17.24■□□□□ 0.35
NUP88-210ENST00000574867 RPL26L1Q9UNX3 145 aaKnown RBP17.24■□□□□ 0.35
NUP88-210ENST00000574867 A0A1W2PP55 124 aa17.23■□□□□ 0.35
NUP88-210ENST00000574867 PGLSO95336 258 aa17.23■□□□□ 0.35
NUP88-210ENST00000574867 KRT14P02533 472 aa17.23■□□□□ 0.35
NUP88-210ENST00000574867 NFKBIAP25963 317 aa17.23■□□□□ 0.35
NUP88-210ENST00000574867 RPL22P35268 128 aaKnown RBP17.23■□□□□ 0.35
NUP88-210ENST00000574867 TNNT3P45378 269 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms