RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 SRGAP2O75044 1071 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 F9P00740 461 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 UGT2B4P06133 528 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 CELA2BP08218 269 aaPredicted RBP12.1□□□□□ -0.47
CTNS-208ENST00000574218 XPAP23025 273 aaPredicted RBP12.1□□□□□ -0.47
CTNS-208ENST00000574218 ETFBP38117 255 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 PPP1R2P41236 205 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 HK3P52790 923 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 CYP4F2P78329 520 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 SLC6A3Q01959 620 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 RAD51Q06609 339 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 KCNAB2Q13303 367 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 PKP1Q13835 747 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 ARHGEF7Q14155 803 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 TTC7BQ86TV6 843 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 PASD1Q8IV76 773 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 OR6K2Q8NGY2 324 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 LMO3Q8TAP4 145 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 CPXM1Q96SM3 734 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 EPAS1Q99814 870 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 ZYG11BQ9C0D3 744 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 SCAND2PQ9GZW5 306 aaPredicted RBP12.1□□□□□ -0.47
CTNS-208ENST00000574218 PIGVQ9NUD9 493 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 ARHGEF38Q9NXL2 777 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.1□□□□□ -0.47
CTNS-208ENST00000574218 GGT7Q9UJ14 662 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 RABGEF1Q9UJ41 708 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 HOOK1Q9UJC3 728 aaKnown RBP12.1□□□□□ -0.47
CTNS-208ENST00000574218 HPCAL4Q9UM19 191 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 SNX10Q9Y5X0 201 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 ARHGEF17Q96PE2 2063 aaPredicted RBP12.1□□□□□ -0.47
CTNS-208ENST00000574218 TEX15Q9BXT5 2789 aa12.1□□□□□ -0.47
CTNS-208ENST00000574218 A0A1W2PQM1 296 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 DRGXA6NNA5 263 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 STMND1H3BQB6 276 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 MMP20O60882 483 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 ZNF821O75541 412 aaPredicted RBP12.09□□□□□ -0.47
CTNS-208ENST00000574218 CR2P20023 1033 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 CXCR3P49682 368 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 PEX5P50542 639 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 RNASE9P60153 205 aaKnown RBP12.09□□□□□ -0.47
CTNS-208ENST00000574218 ARF5P84085 180 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 GNA12Q03113 381 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 SERINC3Q13530 473 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 CLCA4Q14CN2 919 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 SKIDA1Q1XH10 827 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 KLHL40Q2TBA0 621 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 MAP9Q49MG5 647 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 ENPP7Q6UWV6 458 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 OLFML1Q6UWY5 402 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 SLC26A9Q7LBE3 791 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 PLPP6Q8IY26 295 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 DRC7Q8IY82 874 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 IL22RA1Q8N6P7 574 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 SNX21Q969T3 373 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 TSACCQ96A04 125 aaPredicted RBP12.09□□□□□ -0.47
CTNS-208ENST00000574218 ISG20Q96AZ6 181 aaKnown RBP12.09□□□□□ -0.47
CTNS-208ENST00000574218 CENPTQ96BT3 561 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 DHTKD1Q96HY7 919 aaPredicted RBP12.09□□□□□ -0.47
CTNS-208ENST00000574218 C1orf74Q96LT6 269 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 KLHL32Q96NJ5 620 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 FUCA2Q9BTY2 467 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 EPN3Q9H201 632 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 GOLPH3LQ9H4A5 285 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 KLQ9UEF7 1012 aa12.09□□□□□ -0.47
CTNS-208ENST00000574218 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.09□□□□□ -0.47
CTNS-208ENST00000574218 ZW10O43264 779 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 POP4O95707 220 aaKnown RBP12.08□□□□□ -0.48
CTNS-208ENST00000574218 GNA14O95837 355 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 GSRP00390 522 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 TNFP01375 233 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 GLB1P16278 677 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 GKP32189 559 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 KRT9P35527 623 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 ETV5P41161 510 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 CCR10P46092 362 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 POLE2P56282 527 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 NFATC4Q14934 902 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 NCAPHQ15003 741 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 LRRC14Q15048 493 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 IRF4Q15306 451 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 ARHGAP44Q17R89 818 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 C4orf17Q53FE4 359 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 GDPD4Q6W3E5 623 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 ZNF354CQ86Y25 554 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 ZDHHC17Q8IUH5 632 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 C1orf131Q8NDD1 294 aaKnown RBP12.08□□□□□ -0.48
CTNS-208ENST00000574218 CCDC112Q8NEF3 446 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 ZNF397Q8NF99 534 aaPredicted RBP12.08□□□□□ -0.48
CTNS-208ENST00000574218 OR2AP1Q8NGE2 309 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 HTR3CQ8WXA8 447 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 JPH3Q8WXH2 748 aaPredicted RBP12.08□□□□□ -0.48
CTNS-208ENST00000574218 WRAP53Q9BUR4 548 aaKnown RBP12.08□□□□□ -0.48
CTNS-208ENST00000574218 PDCL3Q9H2J4 239 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 ACP6Q9NPH0 428 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 FOXJ2Q9P0K8 574 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 ANAPC2Q9UJX6 822 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 PNMA8BQ9ULN7 279 aaPredicted RBP12.08□□□□□ -0.48
CTNS-208ENST00000574218 ATP6V1DQ9Y5K8 247 aa12.08□□□□□ -0.48
CTNS-208ENST00000574218 RNF215Q9Y6U7 377 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms