RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 TSPAN6O43657 245 aa20.9■□□□□ 0.94
CHMP6-204ENST00000572778 PEX11BO96011 259 aa20.9■□□□□ 0.94
CHMP6-204ENST00000572778 TIMP2P16035 220 aa20.9■□□□□ 0.94
CHMP6-204ENST00000572778 SERPINA4P29622 427 aa20.9■□□□□ 0.94
CHMP6-204ENST00000572778 CTSKP43235 329 aa20.9■□□□□ 0.94
CHMP6-204ENST00000572778 NAP1L1P55209 391 aaKnown RBP20.9■□□□□ 0.94
CHMP6-204ENST00000572778 BCL2L1Q07817 233 aa20.9■□□□□ 0.94
CHMP6-204ENST00000572778 MARC1Q5VT66 337 aa20.9■□□□□ 0.94
CHMP6-204ENST00000572778 KIAA1161Q6NSJ0 714 aa20.9■□□□□ 0.94
CHMP6-204ENST00000572778 ZNF641Q96N77 438 aaPredicted RBP20.9■□□□□ 0.94
CHMP6-204ENST00000572778 ATP13A3Q9H7F0 1226 aa20.9■□□□□ 0.94
CHMP6-204ENST00000572778 FZD3Q9NPG1 666 aa20.9■□□□□ 0.94
CHMP6-204ENST00000572778 GGT7Q9UJ14 662 aa20.9■□□□□ 0.94
CHMP6-204ENST00000572778 CA5BQ9Y2D0 317 aa20.9■□□□□ 0.94
CHMP6-204ENST00000572778 REXO2Q9Y3B8 237 aaKnown RBP20.9■□□□□ 0.94
CHMP6-204ENST00000572778 PCDH15Q96QU1 1955 aa20.9■□□□□ 0.94
CHMP6-204ENST00000572778 TTC24A2A3L6 582 aaPredicted RBP20.89■□□□□ 0.93
CHMP6-204ENST00000572778 TLR4O00206 839 aa20.89■□□□□ 0.93
CHMP6-204ENST00000572778 GJB3O75712 270 aa20.89■□□□□ 0.93
CHMP6-204ENST00000572778 KCNK5O95279 499 aa20.89■□□□□ 0.93
CHMP6-204ENST00000572778 ITIH2P19823 946 aa20.89■□□□□ 0.93
CHMP6-204ENST00000572778 AKT2P31751 481 aa20.89■□□□□ 0.93
CHMP6-204ENST00000572778 GARSP41250 739 aaKnown RBP20.89■□□□□ 0.93
CHMP6-204ENST00000572778 GBE1Q04446 702 aa20.89■□□□□ 0.93
CHMP6-204ENST00000572778 GALNT2Q10471 571 aa20.89■□□□□ 0.93
CHMP6-204ENST00000572778 TMEM259Q4ZIN3 620 aa20.89■□□□□ 0.93
CHMP6-204ENST00000572778 HCAR2Q8TDS4 363 aa20.89■□□□□ 0.93
CHMP6-204ENST00000572778 SLC17A9Q9BYT1 436 aa20.89■□□□□ 0.93
CHMP6-204ENST00000572778 TM7SF3Q9NS93 570 aa20.89■□□□□ 0.93
CHMP6-204ENST00000572778 FNDC3AQ9Y2H6 1198 aaKnown RBP20.89■□□□□ 0.93
CHMP6-204ENST00000572778 DNAH14Q0VDD8 3507 aa20.89■□□□□ 0.93
CHMP6-204ENST00000572778 IGLON5A6NGN9 336 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 C3orf70A6NLC5 250 aaPredicted RBP20.88■□□□□ 0.93
CHMP6-204ENST00000572778 ZNF487B1APH4 448 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 AREL1O15033 823 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 PAK4O96013 591 aaPredicted RBP20.88■□□□□ 0.93
CHMP6-204ENST00000572778 CD59P13987 128 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 HNRNPA2B1P22626 353 aaKnown RBP20.88■□□□□ 0.93
CHMP6-204ENST00000572778 HSPA9P38646 679 aaKnown RBP20.88■□□□□ 0.93
CHMP6-204ENST00000572778 MMP13P45452 471 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 NOVA1P51513 510 aaKnown RBP20.88■□□□□ 0.93
CHMP6-204ENST00000572778 AP1S1P61966 158 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 SGCGQ13326 291 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 SLC14A1Q13336 389 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 IFI16Q16666 785 aaKnown RBP20.88■□□□□ 0.93
CHMP6-204ENST00000572778 PRAMEF14Q5SWL7 426 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 DAAM2Q86T65 1068 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 KIAA1328Q86T90 577 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 RFX6Q8HWS3 928 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 TMEM139Q8IV31 216 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 PGBD5Q8N414 524 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 MFSD2AQ8NA29 543 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 DEFB124Q8NES8 71 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 TPCN2Q8NHX9 752 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 LRRN4Q8WUT4 740 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 ZNF830Q96NB3 372 aaPredicted RBP20.88■□□□□ 0.93
CHMP6-204ENST00000572778 SLC32A1Q9H598 525 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 SCUBE2Q9NQ36 999 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 GDF3Q9NR23 364 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 DTLQ9NZJ0 730 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 SALL4Q9UJQ4 1053 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 DUSP10Q9Y6W6 482 aa20.88■□□□□ 0.93
CHMP6-204ENST00000572778 H0Y8X5 98 aa20.87■□□□□ 0.93
CHMP6-204ENST00000572778 APOL1O14791 398 aa20.87■□□□□ 0.93
CHMP6-204ENST00000572778 SPINT1O43278 529 aa20.87■□□□□ 0.93
CHMP6-204ENST00000572778 PSTPIP1O43586 416 aa20.87■□□□□ 0.93
CHMP6-204ENST00000572778 MX2P20592 715 aa20.87■□□□□ 0.93
CHMP6-204ENST00000572778 CSRP1P21291 193 aaKnown RBP20.87■□□□□ 0.93
CHMP6-204ENST00000572778 VAV2P52735 878 aa20.87■□□□□ 0.93
CHMP6-204ENST00000572778 MAXP61244 160 aa20.87■□□□□ 0.93
CHMP6-204ENST00000572778 ITKQ08881 620 aa20.87■□□□□ 0.93
CHMP6-204ENST00000572778 SLC10A2Q12908 348 aaPredicted RBP20.87■□□□□ 0.93
CHMP6-204ENST00000572778 UGP2Q16851 508 aa20.87■□□□□ 0.93
CHMP6-204ENST00000572778 TIGD7Q6NT04 549 aaPredicted RBP20.87■□□□□ 0.93
CHMP6-204ENST00000572778 PSAPL1Q6NUJ1 521 aa20.87■□□□□ 0.93
CHMP6-204ENST00000572778 C11orf63Q6NUN7 778 aa20.87■□□□□ 0.93
CHMP6-204ENST00000572778 BRAT1Q6PJG6 821 aa20.87■□□□□ 0.93
CHMP6-204ENST00000572778 VSIG1Q86XK7 387 aa20.87■□□□□ 0.93
CHMP6-204ENST00000572778 CCNYQ8ND76 341 aa20.87■□□□□ 0.93
CHMP6-204ENST00000572778 CXorf40AQ8TE69 158 aa20.87■□□□□ 0.93
CHMP6-204ENST00000572778 NT5MQ9NPB1 228 aa20.87■□□□□ 0.93
CHMP6-204ENST00000572778 HEY1Q9Y5J3 304 aa20.87■□□□□ 0.93
CHMP6-204ENST00000572778 LAMA1P25391 3075 aa20.87■□□□□ 0.93
CHMP6-204ENST00000572778 DCHS1Q96JQ0 3298 aa20.87■□□□□ 0.93
CHMP6-204ENST00000572778 ADAMTS9Q9P2N4 1935 aa20.86■□□□□ 0.93
CHMP6-204ENST00000572778 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.86■□□□□ 0.93
CHMP6-204ENST00000572778 TSPAN11A1L157 253 aa20.86■□□□□ 0.93
CHMP6-204ENST00000572778 UPK3BL1B0FP48 263 aa20.86■□□□□ 0.93
CHMP6-204ENST00000572778 UPK3BL2E5RIL1 263 aa20.86■□□□□ 0.93
CHMP6-204ENST00000572778 GIPC1O14908 333 aa20.86■□□□□ 0.93
CHMP6-204ENST00000572778 MATN3O15232 486 aa20.86■□□□□ 0.93
CHMP6-204ENST00000572778 MAGEC1O60732 1142 aa20.86■□□□□ 0.93
CHMP6-204ENST00000572778 MMP20O60882 483 aa20.86■□□□□ 0.93
CHMP6-204ENST00000572778 NEBLO76041 1014 aa20.86■□□□□ 0.93
CHMP6-204ENST00000572778 CCNCP24863 283 aa20.86■□□□□ 0.93
CHMP6-204ENST00000572778 SUOXP51687 545 aa20.86■□□□□ 0.93
CHMP6-204ENST00000572778 CLDN2P57739 230 aa20.86■□□□□ 0.93
CHMP6-204ENST00000572778 NXPH1P58417 271 aa20.86■□□□□ 0.93
CHMP6-204ENST00000572778 DYNLT1P63172 113 aa20.86■□□□□ 0.93
CHMP6-204ENST00000572778 HNRNPDQ14103 355 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms