RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.79□□□□□ -1
TRAPPC1-203ENST00000571739 HCAR2Q8TDS4 363 aa8.79□□□□□ -1
TRAPPC1-203ENST00000571739 KLK6Q92876 244 aa8.79□□□□□ -1
TRAPPC1-203ENST00000571739 ECHDC3Q96DC8 303 aa8.79□□□□□ -1
TRAPPC1-203ENST00000571739 RBM41Q96IZ5 413 aaKnown RBP8.79□□□□□ -1
TRAPPC1-203ENST00000571739 ZNF641Q96N77 438 aaPredicted RBP8.79□□□□□ -1
TRAPPC1-203ENST00000571739 NUDCD1Q96RS6 583 aa8.79□□□□□ -1
TRAPPC1-203ENST00000571739 TUBGCP5Q96RT8 1024 aa8.79□□□□□ -1
TRAPPC1-203ENST00000571739 IL12RB2Q99665 862 aa8.79□□□□□ -1
TRAPPC1-203ENST00000571739 OSBPL1AQ9BXW6 950 aa8.79□□□□□ -1
TRAPPC1-203ENST00000571739 MIR1-1HGQ9H1L0 117 aa8.79□□□□□ -1
TRAPPC1-203ENST00000571739 CAPN10Q9HC96 672 aa8.79□□□□□ -1
TRAPPC1-203ENST00000571739 NT5MQ9NPB1 228 aa8.79□□□□□ -1
TRAPPC1-203ENST00000571739 LZTFL1Q9NQ48 299 aa8.79□□□□□ -1
TRAPPC1-203ENST00000571739 RBM22Q9NW64 420 aaKnown RBP eCLIP8.79□□□□□ -1
TRAPPC1-203ENST00000571739 GGT7Q9UJ14 662 aa8.79□□□□□ -1
TRAPPC1-203ENST00000571739 EFR3BQ9Y2G0 817 aa8.79□□□□□ -1
TRAPPC1-203ENST00000571739 ATP8A1Q9Y2Q0 1164 aa8.79□□□□□ -1
TRAPPC1-203ENST00000571739 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.79□□□□□ -1
TRAPPC1-203ENST00000571739 PCDHGC4Q9Y5F7 938 aa8.79□□□□□ -1
TRAPPC1-203ENST00000571739 VPS13AQ96RL7 3174 aa8.79□□□□□ -1
TRAPPC1-203ENST00000571739 SHROOM3Q8TF72 1996 aa8.79□□□□□ -1
TRAPPC1-203ENST00000571739 A0A1B0GTW7 788 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 A0A1W2PQU0 124 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 TSPAN11A1L157 253 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 MEI4A8MW99 385 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 KCNK1O00180 336 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 KHNYNO15037 678 aaKnown RBP8.78□□□□□ -1
TRAPPC1-203ENST00000571739 BCAT2O15382 392 aaPredicted RBP8.78□□□□□ -1
TRAPPC1-203ENST00000571739 HTRA2O43464 458 aaPredicted RBP8.78□□□□□ -1
TRAPPC1-203ENST00000571739 AP1G1O43747 822 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 WNT1P04628 370 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 PRKCGP05129 697 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 HLA-DQB2P05538 268 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 SERPINF2P08697 491 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 TGM2P21980 687 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 MAT2AP31153 395 aaKnown RBP8.78□□□□□ -1
TRAPPC1-203ENST00000571739 HOXD12P35452 270 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 HSPA9P38646 679 aaKnown RBP8.78□□□□□ -1
TRAPPC1-203ENST00000571739 NR2C2P49116 596 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 CSNK1EP49674 416 aaKnown RBP8.78□□□□□ -1
TRAPPC1-203ENST00000571739 COPS2P61201 443 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 SEMG2Q02383 582 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 DSC2Q02487 901 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 NIPAL4Q0D2K0 466 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 CCDC15Q0P6D6 951 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 AP1B1Q10567 949 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 ZNF211Q13398 564 aaPredicted RBP8.78□□□□□ -1
TRAPPC1-203ENST00000571739 TFDP2Q14188 446 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 GRM3Q14832 879 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 PDK1Q15118 436 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 UGP2Q16851 508 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 ZNF284Q2VY69 593 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 LRRC73Q5JTD7 316 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 MEI1Q5TIA1 1274 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 SEL1L3Q68CR1 1132 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 ALG1LQ6GMV1 187 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 TIGD7Q6NT04 549 aaPredicted RBP8.78□□□□□ -1
TRAPPC1-203ENST00000571739 NEK5Q6P3R8 708 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 TRIM69Q86WT6 500 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 HORMAD1Q86X24 394 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 CCDC50Q8IVM0 306 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 REXO1L1PQ8IX06 675 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 ZCCHC9Q8N567 271 aaKnown RBP8.78□□□□□ -1
TRAPPC1-203ENST00000571739 CEP76Q8TAP6 659 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 NSMCE1Q8WV22 266 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 SNX19Q92543 992 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 PPP1R16AQ96I34 528 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 SEMA3CQ99985 751 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 OSBPL8Q9BZF1 889 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 TSGA10Q9BZW7 698 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 C10orf88Q9H8K7 445 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 PREBQ9HCU5 417 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 TM9SF3Q9HD45 589 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 DYRK4Q9NR20 520 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 SLC6A14Q9UN76 642 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 ITM2BQ9Y287 266 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 PPP2R2CQ9Y2T4 447 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 FAM186AA6NE01 2351 aa8.78□□□□□ -1
TRAPPC1-203ENST00000571739 EP300Q09472 2414 aaPredicted RBP8.78□□□□□ -1
TRAPPC1-203ENST00000571739 RIF1Q5UIP0 2472 aaKnown RBP8.77□□□□□ -1.01
TRAPPC1-203ENST00000571739 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.77□□□□□ -1.01
TRAPPC1-203ENST00000571739 A0A1W2PR77 199 aa8.77□□□□□ -1.01
TRAPPC1-203ENST00000571739 TCRBV7S2A1N4TA0A589 114 aa8.77□□□□□ -1.01
TRAPPC1-203ENST00000571739 LNP1A1A4G5 178 aa8.77□□□□□ -1.01
TRAPPC1-203ENST00000571739 MIF4GDA9UHW6 222 aaKnown RBP8.77□□□□□ -1.01
TRAPPC1-203ENST00000571739 KCNK3O14649 394 aa8.77□□□□□ -1.01
TRAPPC1-203ENST00000571739 RIOK3O14730 519 aaKnown RBP8.77□□□□□ -1.01
TRAPPC1-203ENST00000571739 SLC31A1O15431 190 aa8.77□□□□□ -1.01
TRAPPC1-203ENST00000571739 TSPAN6O43657 245 aa8.77□□□□□ -1.01
TRAPPC1-203ENST00000571739 FZD6O60353 706 aa8.77□□□□□ -1.01
TRAPPC1-203ENST00000571739 MMP20O60882 483 aa8.77□□□□□ -1.01
TRAPPC1-203ENST00000571739 PCDH8O95206 1070 aa8.77□□□□□ -1.01
TRAPPC1-203ENST00000571739 PAK4O96013 591 aaPredicted RBP8.77□□□□□ -1.01
TRAPPC1-203ENST00000571739 PRLP01236 227 aa8.77□□□□□ -1.01
TRAPPC1-203ENST00000571739 CFIP05156 583 aa8.77□□□□□ -1.01
TRAPPC1-203ENST00000571739 MMP2P08253 660 aa8.77□□□□□ -1.01
TRAPPC1-203ENST00000571739 PDHA1P08559 390 aa8.77□□□□□ -1.01
TRAPPC1-203ENST00000571739 PTPN7P35236 360 aa8.77□□□□□ -1.01
TRAPPC1-203ENST00000571739 DPP6P42658 865 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms