RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 APPL1Q9UKG1 709 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 AGAP1Q9UPQ3 857 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 CFL2Q9Y281 166 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 DERAQ9Y315 318 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 REXO2Q9Y3B8 237 aaKnown RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 CLCA3PQ9Y6N3 262 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 KIAA1671Q9BY89 1806 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 NFASCO94856 1347 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 ADGRA2Q96PE1 1338 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 IGSF9BQ9UPX0 1349 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 TET1Q8NFU7 2136 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 NLRC5Q86WI3 1866 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 VWA8A3KMH1 1905 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 GREB1Q4ZG55 1949 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 FNDC1Q4ZHG4 1894 aaPredicted RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 A0A1B0GWJ7 208 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 A0A1W2PP55 124 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 HEATR9A2RTY3 570 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 WDR91A4D1P6 747 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 GOLGA8IPA6NC78 632 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 FAM47DPA6NHR8 397 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 GOLGA8JA6NMD2 632 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 WDR64B1ANS9 1081 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 CHURC1-FNTBB4DL54 471 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ANKRD63C9JTQ0 380 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 F8W810 466 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 H0Y8G0 127 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 H3BNC9 293 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 IGF2BP3O00425 579 aaKnown RBP eCLIP3.61□□□□□ -1.83
SMG6-208ENST00000570874 DVL2O14641 736 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ARHGAP6O43182 974 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 TLR2O60603 784 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 CLN5O75503 358 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 AKAP3O75969 853 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 NOL4O94818 638 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 SCAF4O95104 1147 aaKnown RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 LYPLA2O95372 231 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 STAU1O95793 577 aaKnown RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 OTCP00480 354 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 TFRCP02786 760 aaKnown RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 HMGCRP04035 888 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 CSF2P04141 144 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 NR3C1P04150 777 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ALDH2P05091 517 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ALPPP05187 535 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 CLEC3BP05452 202 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ITGAVP06756 1048 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 INHBAP08476 426 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 TRIM49P0CI25 452 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 TRIM49CP0CI26 452 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 STAG3L3P0CL85 134 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 PNMA6AP0CW24 399 aaPredicted RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 ALPPL2P10696 532 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 POU2F1P14859 743 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ATP2A2P16615 1042 aaKnown RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 SLC9A1P19634 815 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 C5AR1P21730 350 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 TGM1P22735 817 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 CES1P23141 567 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 NR2F2P24468 414 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 MCM3P25205 808 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 MARK3P27448 753 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ABCD3P28288 659 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 CTGFP29279 349 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ICAM3P32942 547 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 SCTRP47872 440 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 LMAN1P49257 510 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 STARP49675 285 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 CYP2J2P51589 502 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ARSDP51689 593 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 JAK3P52333 1124 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 CASP9P55211 416 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ADARP55265 1226 aaKnown RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 PEX3P56589 373 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ERVFC1P60507 584 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 MYL6P60660 151 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ETF1P62495 437 aaKnown RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 FKBP3Q00688 224 aaKnown RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 KRT76Q01546 638 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 DSC2Q02487 901 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 LRRC63Q05C16 580 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 SCN1BQ07699 218 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 HSPA14Q0VDF9 509 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 IL24Q13007 206 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 GPS1Q13098 491 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ADAM9Q13443 819 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 DDX39BQ13838 428 aaKnown RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 CAPSQ13938 189 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 CBFBQ13951 182 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 PDK1Q15118 436 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 STXBP2Q15833 593 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ZNF124Q15973 351 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 CRY1Q16526 586 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 BMT2Q1RMZ1 405 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 PRAMEF14Q5SWL7 426 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 PRAMEF19Q5SWL8 479 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 MPP7Q5T2T1 576 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 LIN9Q5TKA1 542 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 SCARA3Q6AZY7 606 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms