RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 DNAAF5Q86Y56 855 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 DCP2Q8IU60 420 aaKnown RBP12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 FNIP1Q8TF40 1166 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 SNRNP25Q9BV90 132 aaKnown RBP12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 KLC2Q9H0B6 622 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 CBX8Q9HC52 389 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 UBA2Q9UBT2 640 aaPredicted RBP12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 PCSK1NQ9UHG2 260 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 ITM2BQ9Y287 266 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 HS3ST3A1Q9Y663 406 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 TMEM131Q92545 1883 aa12.53□□□□□ -0.4
CTDNEP1-205ENST00000570828 FAM149AA5PLN7 773 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 IGLON5A6NGN9 336 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 CKMT2P17540 419 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 XPAP23025 273 aaPredicted RBP12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 DGKAP23743 735 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 MIPP30301 263 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 NDST2P52849 883 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 PRR20EP86478 221 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 PRR20CP86479 221 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 PRR20DP86480 221 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 PRR20BP86481 221 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 PRR20AP86496 221 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 FGL2Q14314 439 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 NR1I3Q14994 352 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 PPP6R3Q5H9R7 873 aaPredicted RBP12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 FIGNQ5HY92 759 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 ERMARDQ5T6L9 678 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 RFX8Q6ZV50 586 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 TTC7BQ86TV6 843 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 LUZP1Q86V48 1076 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 VPS36Q86VN1 386 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 TMPRSS12Q86WS5 348 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 PROSER1Q86XN7 944 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 SLC22A18ASQ8N1D0 253 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 NETO2Q8NC67 525 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 DENND6BQ8NEG7 585 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 IFT43Q96FT9 208 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 CELF6Q96J87 481 aaKnown RBP12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 EXOC2Q96KP1 924 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 PEBP4Q96S96 227 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 C1QTNF7Q9BXJ2 289 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 C1QTNF2Q9BXJ5 285 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 TRIM7Q9C029 511 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 LRRC19Q9H756 370 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 MRPL47Q9HD33 250 aaKnown RBP12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 DNAJC28Q9NX36 388 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 MYO1AQ9UBC5 1043 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 GGT7Q9UJ14 662 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 DOCK4Q8N1I0 1966 aa12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 DSPP15924 2871 aaKnown RBP12.52□□□□□ -0.41
CTDNEP1-205ENST00000570828 COL5A1P20908 1838 aaPredicted RBP12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 A0A1W2PQJ5 194 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 POM121BA6NF01 834 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 ARHGAP42A6NI28 874 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 GOLGA6L19H0YKK7 550 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 H3BM21 787 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 AREL1O15033 823 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 RAD51BO15315 384 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 FFAR2O15552 330 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 SPINT1O43278 529 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 SIGLEC6O43699 453 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 PRAMEF11O60813 436 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 PIAS2O75928 621 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 ALPPL2P10696 532 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 SKILP12757 684 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 ZNF135P52742 658 aaPredicted RBP12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 DAB2P98082 770 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 FANCCQ00597 558 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 ZNF211Q13398 564 aaPredicted RBP12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 ILKQ13418 452 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 GRM3Q14832 879 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 CA9Q16790 459 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 LRRC73Q5JTD7 316 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 CFAP58Q5T655 872 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 PARGQ86W56 976 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 MARCH9Q86YJ5 346 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 PSTKQ8IV42 348 aaKnown RBP12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 ARFGAP1Q8N6T3 406 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 MDM1Q8TC05 714 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 CXorf40AQ8TE69 158 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 ASB12Q8WXK4 309 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 TSC1Q92574 1164 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 BMFQ96LC9 184 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 LENG8Q96PV6 779 aaPredicted RBP12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 KCTD15Q96SI1 283 aaPredicted RBP12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 PDFQ9HBH1 243 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 UCKL1Q9NWZ5 548 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 DKK3Q9UBP4 350 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 LHX3Q9UBR4 397 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 IPO11Q9UI26 975 aaKnown RBP12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 MFHAS1Q9Y4C4 1052 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 PCDHB3Q9Y5E6 796 aa12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 BZW2Q9Y6E2 419 aaKnown RBP12.51□□□□□ -0.41
CTDNEP1-205ENST00000570828 ZFYVE26Q68DK2 2539 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 SPTY2D1-AS1A0A0U1RR47 76 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 NEMP2A6NFY4 417 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 J3KR12 359 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 DFFAO00273 331 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms