RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 IL12RB2Q99665 862 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 WRAP53Q9BUR4 548 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 CINPQ9BW66 212 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 SLC13A1Q9BZW2 595 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 KLC2Q9H0B6 622 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 HSD3B7Q9H2F3 369 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 USP29Q9HBJ7 922 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 TAS2R14Q9NYV8 317 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 AIPL1Q9NZN9 384 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 NCKIPSDQ9NZQ3 722 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 SPASTQ9UBP0 616 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 GGT7Q9UJ14 662 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 DOLKQ9UPQ8 538 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 NEU3Q9UQ49 428 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 MFHAS1Q9Y4C4 1052 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 CEP295Q9C0D2 2601 aa9.04□□□□□ -0.96
NPLOC4-204ENST00000570324 CPED1A4D0V7 1026 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 J3KR12 359 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 RRP8O43159 456 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 AQP9O43315 295 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 LZTS3O60299 673 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 NEBLO76041 1014 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 MT-CO3P00414 261 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 MYBL1P10243 752 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 CKMT1AP12532 417 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 SKILP12757 684 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 CTSEP14091 401 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 NME1P15531 152 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 TIMP2P16035 220 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 SERPINA4P29622 427 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 ARL4AP40617 200 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 RPIAP49247 311 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 PAPOLAP51003 745 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 BLKP51451 505 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 ZNF135P52742 658 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 YPEL5P62699 121 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 OGDHQ02218 1023 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 FGL2Q14314 439 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 FZD2Q14332 565 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 CYTH1Q15438 398 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 KLHL40Q2TBA0 621 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 PLEKHA7Q6IQ23 1121 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 ZCCHC8Q6NZY4 707 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 RFX8Q6ZV50 586 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 ZNF571Q7Z3V5 609 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 ZNF548Q8NEK5 533 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 HCAR2Q8TDS4 363 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 ZNF641Q96N77 438 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 DEPDC7Q96QD5 511 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 KLF6Q99612 283 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 SNRNP25Q9BV90 132 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 CPEB1Q9BZB8 566 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 EDEM3Q9BZQ6 932 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 SLC39A8Q9C0K1 460 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 NRSN2Q9GZP1 204 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 SUV39H2Q9H5I1 410 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 NOL6Q9H6R4 1146 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 ATP13A3Q9H7F0 1226 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 ZWILCHQ9H900 591 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 DKK3Q9UBP4 350 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 LHX3Q9UBR4 397 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 APOBEC3BQ9UH17 382 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 GPSM3Q9Y4H4 160 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 CSNK1G3Q9Y6M4 447 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 GOLGA4Q13439 2230 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 CHD5Q8TDI0 1954 aa9.03□□□□□ -0.96
NPLOC4-204ENST00000570324 A0A1B0GTH6 734 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 TMEM191CA6NGB0 347 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 EIF4E1BA6NMX2 242 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 TMEM110-MUSTN1A8MSY1 372 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 H3BRJ5 948 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 K7ESM1 405 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 TOR1BO14657 336 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 RIOK3O14730 519 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 AREL1O15033 823 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 INSIG1O15503 277 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 OPA1O60313 960 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 PRAMEF11O60813 436 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 PIGNO95427 931 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 ANXA6P08133 673 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 ERCC2P18074 760 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 ITIH2P19823 946 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 PTMSP20962 102 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 HTR1BP28222 390 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 MIPP30301 263 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 ACTN2P35609 894 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 EIF4A3P38919 411 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 PRKCIP41743 596 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 SSR1P43307 286 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 ABCG1P45844 678 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 RENBPP51606 427 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 ADKP55263 362 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 PFN3P60673 137 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 POLR2LP62875 67 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 INSM1Q01101 510 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 PPARDQ03181 441 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 BCL2L1Q07817 233 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 NR1I3Q14994 352 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 LRRC14Q15048 493 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms