RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 CENPUQ71F23 418 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 CAND1Q86VP6 1230 aaKnown RBP15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 PAF1Q8N7H5 531 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 DNAAF3Q8N9W5 541 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 CHST14Q8NCH0 376 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 OR2A12Q8NGT7 310 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 EZH1Q92800 747 aaPredicted RBP15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 FEM1CQ96JP0 617 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 NSMCE3Q96MG7 304 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 TDRD1Q9BXT4 1180 aaKnown RBP15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 TSPYL1Q9H0U9 437 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 ARHGEF3Q9NR81 526 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 PIH1D1Q9NWS0 290 aaKnown RBP15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 FBXL21Q9UKT6 434 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 HCN2Q9UL51 889 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 STARD13Q9Y3M8 1113 aa15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 MYO18AQ92614 2054 aaKnown RBP15.58■□□□□ 0.08
HERPUD1-219ENST00000570273 BDP1A6H8Y1 2624 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 TTC28Q96AY4 2481 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 ANTXRLA6NF34 631 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 MAN2B1O00754 1011 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 NPC1O15118 1278 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 POP4O95707 220 aaKnown RBP15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 MLNP12872 115 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 HNRNPLP14866 589 aaKnown RBP eCLIP15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 SERPINA4P29622 427 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 WASP42768 502 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 SESN2P58004 480 aaPredicted RBP15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 CDH17Q12864 832 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 FNBP1LQ5T0N5 605 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 PLPP6Q8IY26 295 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 CHPFQ8IZ52 775 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 SLC25A41Q8N5S1 370 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 GRIN3AQ8TCU5 1115 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 PDCD6IPQ8WUM4 868 aaKnown RBP15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 TUBGCP5Q96RT8 1024 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 ACOX2Q99424 681 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 HEPHQ9BQS7 1158 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 TMEM245Q9H330 911 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 SAYSD1Q9NPB0 183 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 CASS4Q9NQ75 786 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 NDRG2Q9UN36 371 aaKnown RBP15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 CHKBQ9Y259 395 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 PCDHGC4Q9Y5F7 938 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 STON1Q9Y6Q2 735 aa15.57■□□□□ 0.08
HERPUD1-219ENST00000570273 NCOR1O75376 2440 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 WASH3PC4AMC7 463 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 AP3B1O00203 1094 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 EIF3HO15372 352 aaKnown RBP eCLIP15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 SOCS5O75159 536 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 SIN3BO75182 1162 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 AVILO75366 819 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 BANF1O75531 89 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 NDST3O95803 873 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 EPHX1P07099 455 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 H2AFXP16104 143 aaPredicted RBP15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 HLA-DPA1P20036 260 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 KIR2DL1P43626 348 aaPredicted RBP15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 CHRNA4P43681 627 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 PRKCQQ04759 706 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 DHX9Q08211 1270 aaKnown RBP15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 PDIA2Q13087 525 aaKnown RBP15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 GALNT3Q14435 633 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 GRM3Q14832 879 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 MSS51Q4VC12 460 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 FBXO38Q6PIJ6 1188 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 ZNF852Q6ZMS4 543 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 CAMK1DQ8IU85 385 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 LPCAT1Q8NF37 534 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 OR8D1Q8WZ84 308 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 PTPRN2Q92932 1015 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 PHACTR1Q9C0D0 580 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 SUN2Q9UH99 717 aa15.56■□□□□ 0.08
HERPUD1-219ENST00000570273 LOC285095A0A1B0GVY8 99 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 SHISA7A6NL88 538 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 FGF1P05230 155 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 UGT2B4P06133 528 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 ATXN1LP0C7T5 689 aaKnown RBP15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 CD72P21854 359 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 MGAT1P26572 445 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 MAGEA3P43357 314 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 SLMAPQ14BN4 828 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 SLC1A5Q15758 541 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 C2orf27AQ580R0 203 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 SIRPB2Q5JXA9 342 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 CFAP58Q5T655 872 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 ARMC12Q5T9G4 340 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 RANBP10Q6VN20 620 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 TRMT11Q7Z4G4 463 aaKnown RBP15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 TMC3Q7Z5M5 1100 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 ZBED8Q8IZ13 594 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 STK40Q8N2I9 435 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 CAVIN3Q969G5 261 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 TRIB3Q96RU7 358 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 CPEB1Q9BZB8 566 aaKnown RBP15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 BFARQ9NZS9 450 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 IL36AQ9UHA7 158 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 ARIH1Q9Y4X5 557 aaPredicted RBP15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 WASF2Q9Y6W5 498 aa15.55■□□□□ 0.08
HERPUD1-219ENST00000570273 E7ESA3 106 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 216.1 ms