RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 ITGB7P26010 798 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 GARSP41250 739 aaKnown RBP9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 CCR5P51681 352 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 NAP1L1P55209 391 aaKnown RBP9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 PDK2Q15119 407 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 E2F5Q15329 346 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 TMEM259Q4ZIN3 620 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 ZNF542PQ5EBM4 170 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 SPDYCQ5MJ68 293 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 WDR45BQ5MNZ6 344 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 SYCP2LQ5T4T6 812 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 SLC9A4Q6AI14 798 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 DSG4Q86SJ6 1040 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 KIAA1328Q86T90 577 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 TTC7BQ86TV6 843 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 NT5DC3Q86UY8 548 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 C11orf74Q86VG3 221 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 LRRC8AQ8IWT6 810 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 RHOT1Q8IXI2 618 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 PLPP6Q8IY26 295 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 ATPAF2Q8N5M1 289 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 CCNYQ8ND76 341 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 ARRDC2Q8TBH0 407 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 FOXJ1Q92949 421 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 SERAC1Q96JX3 654 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 BMFQ96LC9 184 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 NCAPGQ9BPX3 1015 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 ZNF670Q9BS34 389 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 CINPQ9BW66 212 aaPredicted RBP9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 KCNF1Q9H3M0 494 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 SUV39H2Q9H5I1 410 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 PCDH12Q9NPG4 1184 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 MBNL1Q9NR56 388 aaKnown RBP9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 DLL3Q9NYJ7 618 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 PNMA8BQ9ULN7 279 aaPredicted RBP9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 BTBD3Q9Y2F9 522 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 ANKRD6Q9Y2G4 727 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 FARP1Q9Y4F1 1045 aaPredicted RBP9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 PI4KAP42356 2102 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 RALGAPA1Q6GYQ0 2036 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 CEP192Q8TEP8 1941 aa9.92□□□□□ -0.82
GTF3C1-212ENST00000570129 hCG_1818297A0A087WSY0 165 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 A0A1B0GTW7 788 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 ZSCAN5CA6NGD5 496 aaPredicted RBP9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 LRRC72A6NJI9 287 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 SCAMP1O15126 338 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 CST8O60676 142 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 IGSF6O95976 241 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 TOP3BO95985 862 aaKnown RBP9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 HLA-DQB2P05538 268 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 MMP2P08253 660 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 CD59P13987 128 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 CTPS1P17812 591 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 ID4P47928 161 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 NEK3P51956 506 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 BNIP3Q12983 259 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 HLA-BQ31612 363 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 TMCO4Q5TGY1 634 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 LRRC38Q5VT99 294 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 FBXL19Q6PCT2 694 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 KDELC2Q7Z4H8 507 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 TSPAN33Q86UF1 283 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 HORMAD1Q86X24 394 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 MINDY1Q8N5J2 469 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 LZTR1Q8N653 840 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 TEX26Q8N6G2 289 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 MAML1Q92585 1016 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 PSKH2Q96QS6 385 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 KLF6Q99612 283 aaPredicted RBP9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 SEMA3CQ99985 751 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 AASDHPPTQ9NRN7 309 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 RBM22Q9NW64 420 aaKnown RBP eCLIP9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 SEPT10Q9P0V9 454 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 RCOR3Q9P2K3 495 aaPredicted RBP9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 SCML1Q9UN30 329 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 PCDHA3Q9Y5H8 950 aa9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 ASCC3Q8N3C0 2202 aaKnown RBP9.91□□□□□ -0.82
GTF3C1-212ENST00000570129 PCDH15Q96QU1 1955 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 MED19A0JLT2 244 aaPredicted RBP9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 GOLGA6L3A6NEY3 463 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 BTNL10A8MVZ5 291 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 APOL1O14791 398 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 SLC30A4O14863 429 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 MATN3O15232 486 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 SH3BP5O60239 455 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 PRLP01236 227 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 ALPIP09923 528 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 MYF5P13349 255 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 CCNB1P14635 433 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 SLC1A1P43005 524 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 CTSKP43235 329 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 MMP13P45452 471 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 GEMIN4P57678 1058 aaKnown RBP9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 LMNB2Q03252 620 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 ITKQ08881 620 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 RALGDSQ12967 914 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 NOMO1Q15155 1222 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 MARC1Q5VT66 337 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 C11orf63Q6NUN7 778 aa9.9□□□□□ -0.82
GTF3C1-212ENST00000570129 GCNT7Q6ZNI0 430 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms