RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 GDAP1L1Q96MZ0 367 aa13.04□□□□□ -0.32
CNEP1R1-211ENST00000569647 FRMD8P1Q9BZ68 369 aaPredicted RBP13.04□□□□□ -0.32
CNEP1R1-211ENST00000569647 C10orf88Q9H8K7 445 aa13.04□□□□□ -0.32
CNEP1R1-211ENST00000569647 USP36Q9P275 1121 aaKnown RBP13.04□□□□□ -0.32
CNEP1R1-211ENST00000569647 AMACRQ9UHK6 382 aa13.04□□□□□ -0.32
CNEP1R1-211ENST00000569647 EVLQ9UI08 416 aaPredicted RBP13.04□□□□□ -0.32
CNEP1R1-211ENST00000569647 PILRBQ9UKJ0 227 aa13.04□□□□□ -0.32
CNEP1R1-211ENST00000569647 SAR1BQ9Y6B6 198 aa13.04□□□□□ -0.32
CNEP1R1-211ENST00000569647 WASF2Q9Y6W5 498 aa13.04□□□□□ -0.32
CNEP1R1-211ENST00000569647 LIASO43766 372 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 BNIP3LO60238 219 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 HLA-DQB2P05538 268 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 PTPN3P26045 913 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 RBL1P28749 1068 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 CASQ1P31415 396 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 HOXD12P35452 270 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 RECQLP46063 649 aaPredicted RBP13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 RPS14P62263 151 aaKnown RBP13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 NSUN2Q08J23 767 aaKnown RBP eCLIP13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 OASLQ15646 514 aaKnown RBP13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 MYLK3Q32MK0 819 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 TRIM61Q5EBN2 209 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 PPM1JQ5JR12 505 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 ZNF776Q68DI1 518 aaPredicted RBP13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 CACUL1Q86Y37 369 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 CREG2Q8IUH2 290 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 SLC41A1Q8IVJ1 513 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 BBS5Q8N3I7 341 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 PRELID2Q8N945 189 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 OR6K2Q8NGY2 324 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 C1orf54Q8WWF1 131 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 HTR3CQ8WXA8 447 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 SIPA1Q96FS4 1042 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 NSMCE3Q96MG7 304 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 HSPA12BQ96MM6 686 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 HEPHQ9BQS7 1158 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 USP29Q9HBJ7 922 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 NT5MQ9NPB1 228 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 RBM22Q9NW64 420 aaKnown RBP eCLIP13.03□□□□□ -0.325e-6■■□□□ 13.6
CNEP1R1-211ENST00000569647 SMARCAL1Q9NZC9 954 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 HECAQ9UBI9 543 aaPredicted RBP13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 DNPEPQ9ULA0 475 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 ATP8A1Q9Y2Q0 1164 aa13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 FARP1Q9Y4F1 1045 aaPredicted RBP13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 TP53BP1Q12888 1972 aaPredicted RBP13.03□□□□□ -0.32
CNEP1R1-211ENST00000569647 CHD8Q9HCK8 2581 aa13.02□□□□□ -0.32
CNEP1R1-211ENST00000569647 C4orf47A7E2U8 309 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 RNF103O00237 685 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 CDX4O14627 284 aaPredicted RBP13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 INSIG1O15503 277 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 NDUFS2O75306 463 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 GJB3O75712 270 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 POP4O95707 220 aaKnown RBP13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 JCHAINP01591 159 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 CD6P30203 668 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 GKP32189 559 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 CHRNA3P32297 505 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 DPP6P42658 865 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 TPMTP51580 245 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 MAXP61244 160 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 ZBTB16Q05516 673 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 CST6Q15828 149 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 CCNG2Q16589 344 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 TEX44Q53QW1 395 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 FAM182AQ5T1J6 154 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 DRICH1Q6PGQ1 229 aaPredicted RBP13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 DARS2Q6PI48 645 aaKnown RBP13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 SLC23A3Q6PIS1 610 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 DSG4Q86SJ6 1040 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 SRLQ86TD4 932 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 MMAAQ8IVH4 418 aaKnown RBP13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 TMIEQ8NEW7 156 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 PRCCQ92733 491 aaPredicted RBP13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 TOE1Q96GM8 510 aaKnown RBP13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 NUDCD1Q96RS6 583 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 NAP1L3Q99457 506 aaPredicted RBP13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 NUSAP1Q9BXS6 441 aaKnown RBP13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 CEP41Q9BYV8 373 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 CPEB1Q9BZB8 566 aaKnown RBP13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 ZDHHC6Q9H6R6 413 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 TMEM9BQ9NQ34 198 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 ITM2CQ9NQX7 267 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 WSB2Q9NYS7 404 aaPredicted RBP13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 IL36AQ9UHA7 158 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 SARDHQ9UL12 918 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 PPM1HQ9ULR3 514 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 ACACBO00763 2458 aa13.02□□□□□ -0.33
CNEP1R1-211ENST00000569647 KIF2AO00139 706 aaPredicted RBP13.01□□□□□ -0.33
CNEP1R1-211ENST00000569647 RNASEH1O60930 286 aaKnown RBP13.01□□□□□ -0.33
CNEP1R1-211ENST00000569647 LEFTY1O75610 366 aa13.01□□□□□ -0.33
CNEP1R1-211ENST00000569647 ZNF189O75820 626 aaPredicted RBP13.01□□□□□ -0.33
CNEP1R1-211ENST00000569647 ADH1BP00325 375 aa13.01□□□□□ -0.33
CNEP1R1-211ENST00000569647 IGLV3-19P01714 112 aa13.01□□□□□ -0.33
CNEP1R1-211ENST00000569647 PRNPP04156 253 aa13.01□□□□□ -0.33
CNEP1R1-211ENST00000569647 TUBB4AP04350 444 aa13.01□□□□□ -0.33
CNEP1R1-211ENST00000569647 DRD3P35462 400 aa13.01□□□□□ -0.33
CNEP1R1-211ENST00000569647 PSMD8P48556 350 aa13.01□□□□□ -0.33
CNEP1R1-211ENST00000569647 AP1S1P61966 158 aa13.01□□□□□ -0.33
CNEP1R1-211ENST00000569647 IHHQ14623 411 aa13.01□□□□□ -0.33
CNEP1R1-211ENST00000569647 RALGPS1Q5JS13 557 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms