RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 RAB17Q9H0T7 212 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 ZDHHC4Q9NPG8 344 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 DYRK4Q9NR20 520 aa23.7■■□□□ 1.38
RAB40C-212ENST00000569575 PRR33A8MZF0 331 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 TRAFD1O14545 582 aaPredicted RBP23.69■■□□□ 1.38
RAB40C-212ENST00000569575 SLC7A4O43246 635 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 PI15O43692 258 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 ZNF217O75362 1048 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 LEFTY1O75610 366 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 IL1BP01584 269 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 DNTTP04053 509 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 MMP2P08253 660 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 CD86P42081 329 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 RPS14P62263 151 aaKnown RBP23.69■■□□□ 1.38
RAB40C-212ENST00000569575 C2orf54Q08AI8 447 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 CFAP58Q5T655 872 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 KIAA1211LQ6NV74 962 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 PKN3Q6P5Z2 889 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 RASSF3Q86WH2 238 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 JAMLQ86YT9 394 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 CHST14Q8NCH0 376 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 SIPA1Q96FS4 1042 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 FEM1CQ96JP0 617 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 MRGPRX1Q96LB2 322 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 HDAC8Q9BY41 377 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 MTG2Q9H4K7 406 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 EPHX3Q9H6B9 360 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 LRRC40Q9H9A6 602 aa23.69■■□□□ 1.38
RAB40C-212ENST00000569575 TCRBV21S2A2A0A5A6 115 aa23.68■■□□□ 1.38
RAB40C-212ENST00000569575 ANTXRLA6NF34 631 aa23.68■■□□□ 1.38
RAB40C-212ENST00000569575 E7EVH7 732 aa23.68■■□□□ 1.38
RAB40C-212ENST00000569575 ACADMP11310 421 aa23.68■■□□□ 1.38
RAB40C-212ENST00000569575 PSMB4P28070 264 aa23.68■■□□□ 1.38
RAB40C-212ENST00000569575 SLC8A1P32418 973 aa23.68■■□□□ 1.38
RAB40C-212ENST00000569575 MAGEA6P43360 314 aa23.68■■□□□ 1.38
RAB40C-212ENST00000569575 DRG2P55039 364 aaKnown RBP23.68■■□□□ 1.38
RAB40C-212ENST00000569575 SARNPP82979 210 aaKnown RBP23.68■■□□□ 1.38
RAB40C-212ENST00000569575 ARMC12Q5T9G4 340 aa23.68■■□□□ 1.38
RAB40C-212ENST00000569575 NAPEPLDQ6IQ20 393 aa23.68■■□□□ 1.38
RAB40C-212ENST00000569575 C8orf74Q6P047 294 aa23.68■■□□□ 1.38
RAB40C-212ENST00000569575 MMAAQ8IVH4 418 aaKnown RBP23.68■■□□□ 1.38
RAB40C-212ENST00000569575 CARD6Q9BX69 1037 aa23.68■■□□□ 1.38
RAB40C-212ENST00000569575 TDRD1Q9BXT4 1180 aaKnown RBP23.68■■□□□ 1.38
RAB40C-212ENST00000569575 FAM126AQ9BYI3 521 aaPredicted RBP23.68■■□□□ 1.38
RAB40C-212ENST00000569575 MKRN2Q9H000 416 aaKnown RBP23.68■■□□□ 1.38
RAB40C-212ENST00000569575 RAB6BQ9NRW1 208 aa23.68■■□□□ 1.38
RAB40C-212ENST00000569575 SPATA6Q9NWH7 488 aaPredicted RBP23.68■■□□□ 1.38
RAB40C-212ENST00000569575 FZD4Q9ULV1 537 aa23.68■■□□□ 1.38
RAB40C-212ENST00000569575 PHTF1Q9UMS5 762 aa23.68■■□□□ 1.38
RAB40C-212ENST00000569575 NCKAP1Q9Y2A7 1128 aa23.68■■□□□ 1.38
RAB40C-212ENST00000569575 UTP11Q9Y3A2 253 aaKnown RBP23.68■■□□□ 1.38
RAB40C-212ENST00000569575 RAI2Q9Y5P3 530 aa23.68■■□□□ 1.38
RAB40C-212ENST00000569575 LOC285095A0A1B0GVY8 99 aa23.67■■□□□ 1.38
RAB40C-212ENST00000569575 FZD6O60353 706 aa23.67■■□□□ 1.38
RAB40C-212ENST00000569575 AP2A1O95782 977 aa23.67■■□□□ 1.38
RAB40C-212ENST00000569575 CTSLP07711 333 aa23.67■■□□□ 1.38
RAB40C-212ENST00000569575 COL9A1P20849 921 aa23.67■■□□□ 1.38
RAB40C-212ENST00000569575 ADCY8P40145 1251 aa23.67■■□□□ 1.38
RAB40C-212ENST00000569575 CDK18Q07002 472 aa23.67■■□□□ 1.38
RAB40C-212ENST00000569575 GPS1Q13098 491 aa23.67■■□□□ 1.38
RAB40C-212ENST00000569575 ARMC3Q5W041 872 aa23.67■■□□□ 1.38
RAB40C-212ENST00000569575 GRIN3AQ8TCU5 1115 aa23.67■■□□□ 1.38
RAB40C-212ENST00000569575 FAM131CQ96AQ9 280 aa23.67■■□□□ 1.38
RAB40C-212ENST00000569575 IFT43Q96FT9 208 aa23.67■■□□□ 1.38
RAB40C-212ENST00000569575 RBM15Q96T37 977 aaKnown RBP eCLIP23.67■■□□□ 1.381e-6■■■■■ 29.9
RAB40C-212ENST00000569575 ERP44Q9BS26 406 aa23.67■■□□□ 1.38
RAB40C-212ENST00000569575 FSD1LQ9BXM9 530 aa23.67■■□□□ 1.38
RAB40C-212ENST00000569575 FRMD8Q9BZ67 464 aaPredicted RBP23.67■■□□□ 1.38
RAB40C-212ENST00000569575 PABPC3Q9H361 631 aaKnown RBP23.67■■□□□ 1.38
RAB40C-212ENST00000569575 ETNK1Q9HBU6 452 aa23.67■■□□□ 1.38
RAB40C-212ENST00000569575 PRMT8Q9NR22 394 aaPredicted RBP23.67■■□□□ 1.38
RAB40C-212ENST00000569575 FBXO4Q9UKT5 387 aa23.67■■□□□ 1.38
RAB40C-212ENST00000569575 PPIL1Q9Y3C6 166 aa23.67■■□□□ 1.38
RAB40C-212ENST00000569575 KPNA3O00505 521 aaPredicted RBP23.66■■□□□ 1.38
RAB40C-212ENST00000569575 TTI1O43156 1089 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 LAMTOR5O43504 91 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 SUN1O94901 812 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 PGLSO95336 258 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 METTL18O95568 372 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 IGLV3-19P01714 112 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 UGT2B4P06133 528 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 GABRG2P18507 467 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 HLA-DPA1P20036 260 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 TPSB2P20231 275 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 AVPR2P30518 371 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 OXTRP30559 389 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 NRLP54845 237 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 TPSAB1Q15661 275 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 KCTD11Q693B1 232 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 KDELC1Q6UW63 502 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 CAMK1DQ8IU85 385 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 C1orf210Q8IVY1 113 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 DTWD2Q8NBA8 298 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 GLIS1Q8NBF1 620 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 VOPP1Q96AW1 172 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 KLHL32Q96NJ5 620 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 FAM129AQ9BZQ8 928 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 KDM4CQ9H3R0 1056 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 ARNT2Q9HBZ2 717 aa23.66■■□□□ 1.38
RAB40C-212ENST00000569575 ITM2CQ9NQX7 267 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms