RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 SOCS5O75159 536 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 SEMA4FO95754 770 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 SERPINF2P08697 491 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 ADRB3P13945 408 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 CASQ1P31415 396 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 ACSL1P33121 698 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 CD86P42081 329 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 ADPRHP54922 357 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 ETF1P62495 437 aaKnown RBP13.19□□□□□ -0.3
CNOT1-217ENST00000569263 WASHC5Q12768 1159 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 SNX1Q13596 522 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 PIP5KL1Q5T9C9 394 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 AGBL4Q5VU57 503 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 ITPRIPL1Q6GPH6 555 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 BRAT1Q6PJG6 821 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 LPCAT2Q7L5N7 544 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 PID1Q7Z2X4 250 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 ZNF567Q8N184 647 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 CNTD1Q8N815 330 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 COG1Q8WTW3 980 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 MS4A14Q96JA4 679 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 TEKT5Q96M29 485 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 C16orf45Q96MC5 204 aaPredicted RBP13.19□□□□□ -0.3
CNOT1-217ENST00000569263 GLOD4Q9HC38 313 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 HOMER3Q9NSC5 361 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 DKK3Q9UBP4 350 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 TRHDEQ9UKU6 1024 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 PCDHGC4Q9Y5F7 938 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 SAR1BQ9Y6B6 198 aa13.19□□□□□ -0.3
CNOT1-217ENST00000569263 GOLGA6L10A0A0M3HER8 536 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 A0A1W2PQ67 120 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 MEI4A8MW99 385 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 PLRG1O43660 514 aaKnown RBP13.18□□□□□ -0.3
CNOT1-217ENST00000569263 RHOBTB1O94844 696 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 CPP00450 1065 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 NFKB1P19838 968 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 NIPAL4Q0D2K0 466 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 TRAF2Q12933 501 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 SIX1Q15475 284 aaPredicted RBP13.18□□□□□ -0.3
CNOT1-217ENST00000569263 CCNG2Q16589 344 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 LPAL2Q16609 132 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 FAM182AQ5T1J6 154 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 PAPD7Q5XG87 772 aaKnown RBP13.18□□□□□ -0.3
CNOT1-217ENST00000569263 SYT10Q6XYQ8 523 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 ARMCX6Q7L4S7 300 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 FAM71DQ8N9W8 422 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 OR2T34Q8NGX1 318 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 ARRDC2Q8TBH0 407 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 ACTRT1Q8TDG2 376 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 HCAR2Q8TDS4 363 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 NKD2Q969F2 451 aaPredicted RBP13.18□□□□□ -0.3
CNOT1-217ENST00000569263 RAB7BQ96AH8 199 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 CAPZA3Q96KX2 299 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 TMEM121Q9BTD3 319 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 SLC25A51Q9H1U9 297 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 EPC1Q9H2F5 836 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.18□□□□□ -0.3
CNOT1-217ENST00000569263 RSPH14Q9UHP6 348 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 RAPGEFL1Q9UHV5 662 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 TTC7AQ9ULT0 858 aaPredicted RBP13.18□□□□□ -0.3
CNOT1-217ENST00000569263 SMG5Q9UPR3 1016 aaKnown RBP13.18□□□□□ -0.3
CNOT1-217ENST00000569263 ZNF148Q9UQR1 794 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 RAI2Q9Y5P3 530 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 TNRC6BQ9UPQ9 1833 aaKnown RBP13.18□□□□□ -0.3
CNOT1-217ENST00000569263 NUMA1Q14980 2115 aa13.18□□□□□ -0.3
CNOT1-217ENST00000569263 TBC1D3DA0A087WVF3 549 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 TBC1D3IA0A087WXS9 549 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 TBC1D3EA0A087X179 549 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 TBC1D3KA0A087X1G2 549 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 TSPAN11A1L157 253 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 TBC1D3FA6NER0 549 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-217ENST00000569263 UPK3BL1B0FP48 263 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 TBC1D3LB9A6J9 549 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 UPK3BL2E5RIL1 263 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 F5H423 210 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-217ENST00000569263 NEMP1O14524 444 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 ZNF185O15231 689 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 PCDH8O95206 1070 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 TBC1D3HP0C7X1 549 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 PRLRP16471 622 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 NFKBIAP25963 317 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 NBL1P41271 181 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 ABL2P42684 1182 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 TNNT3P45378 269 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-217ENST00000569263 DHPSP49366 369 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-217ENST00000569263 SUOXP51687 545 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 POLR2LP62875 67 aaKnown RBP13.17□□□□□ -0.3
CNOT1-217ENST00000569263 PLK5Q496M5 336 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 LRRC73Q5JTD7 316 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 ANKRD20A2Q5SQ80 823 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 ARMC12Q5T9G4 340 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 ANKRD20A1Q5TYW2 823 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 ANKRD20A3Q5VUR7 823 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 PMS2CLQ68D20 193 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 TBC1D3GQ6DHY5 549 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 TBC1D3CQ6IPX1 549 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 ARHGEF18Q6ZSZ5 1173 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 TTC7BQ86TV6 843 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 TMEFF1Q8IYR6 380 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms