RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 ITM2BQ9Y287 266 aa16.83■□□□□ 0.28
CDR2-207ENST00000569045 GPSM3Q9Y4H4 160 aa16.83■□□□□ 0.28
CDR2-207ENST00000569045 NBEAQ8NFP9 2946 aa16.83■□□□□ 0.28
CDR2-207ENST00000569045 TOR1BO14657 336 aa16.82■□□□□ 0.28
CDR2-207ENST00000569045 AREL1O15033 823 aa16.82■□□□□ 0.28
CDR2-207ENST00000569045 FTLP02792 175 aaPredicted RBP16.82■□□□□ 0.28
CDR2-207ENST00000569045 MYBL1P10243 752 aa16.82■□□□□ 0.28
CDR2-207ENST00000569045 CKMT1AP12532 417 aa16.82■□□□□ 0.28
CDR2-207ENST00000569045 NME1P15531 152 aaKnown RBP16.82■□□□□ 0.28
CDR2-207ENST00000569045 ZNF135P52742 658 aaPredicted RBP16.82■□□□□ 0.28
CDR2-207ENST00000569045 YPEL5P62699 121 aa16.82■□□□□ 0.28
CDR2-207ENST00000569045 FZD2Q14332 565 aa16.82■□□□□ 0.28
CDR2-207ENST00000569045 ERAP2Q6P179 960 aa16.82■□□□□ 0.28
CDR2-207ENST00000569045 C19orf48Q6RUI8 117 aa16.82■□□□□ 0.28
CDR2-207ENST00000569045 VPS36Q86VN1 386 aa16.82■□□□□ 0.28
CDR2-207ENST00000569045 PSTKQ8IV42 348 aaKnown RBP16.82■□□□□ 0.28
CDR2-207ENST00000569045 CACTIN-AS1Q8N1I8 211 aa16.82■□□□□ 0.28
CDR2-207ENST00000569045 KLF6Q99612 283 aaPredicted RBP16.82■□□□□ 0.28
CDR2-207ENST00000569045 SYT11Q9BT88 431 aa16.82■□□□□ 0.28
CDR2-207ENST00000569045 NRSN2Q9GZP1 204 aa16.82■□□□□ 0.28
CDR2-207ENST00000569045 KLC2Q9H0B6 622 aa16.82■□□□□ 0.28
CDR2-207ENST00000569045 ABCG4Q9H172 646 aa16.82■□□□□ 0.28
CDR2-207ENST00000569045 SCUBE2Q9NQ36 999 aa16.82■□□□□ 0.28
CDR2-207ENST00000569045 GPR27Q9NS67 375 aa16.82■□□□□ 0.28
CDR2-207ENST00000569045 CNOT8Q9UFF9 292 aaKnown RBP16.82■□□□□ 0.28
CDR2-207ENST00000569045 PCSK1NQ9UHG2 260 aa16.82■□□□□ 0.28
CDR2-207ENST00000569045 GGT7Q9UJ14 662 aa16.82■□□□□ 0.28
CDR2-207ENST00000569045 CSNK1G3Q9Y6M4 447 aa16.82■□□□□ 0.28
CDR2-207ENST00000569045 TDRD6O60522 2096 aaKnown RBP16.82■□□□□ 0.28
CDR2-207ENST00000569045 TMEM191CA6NGB0 347 aa16.81■□□□□ 0.28
CDR2-207ENST00000569045 ATMINO43313 823 aaPredicted RBP16.81■□□□□ 0.28
CDR2-207ENST00000569045 MMP20O60882 483 aa16.81■□□□□ 0.28
CDR2-207ENST00000569045 JUNDP17535 347 aa16.81■□□□□ 0.28
CDR2-207ENST00000569045 PRKCIP41743 596 aa16.81■□□□□ 0.28
CDR2-207ENST00000569045 OGDHQ02218 1023 aa16.81■□□□□ 0.28
CDR2-207ENST00000569045 PPP6R3Q5H9R7 873 aaPredicted RBP16.81■□□□□ 0.28
CDR2-207ENST00000569045 ZCCHC8Q6NZY4 707 aaKnown RBP16.81■□□□□ 0.28
CDR2-207ENST00000569045 ZNF548Q8NEK5 533 aaPredicted RBP16.81■□□□□ 0.28
CDR2-207ENST00000569045 FNIP1Q8TF40 1166 aa16.81■□□□□ 0.28
CDR2-207ENST00000569045 HNRNPLLQ8WVV9 542 aaKnown RBP16.81■□□□□ 0.28
CDR2-207ENST00000569045 RFFLQ8WZ73 363 aa16.81■□□□□ 0.28
CDR2-207ENST00000569045 GLMNQ92990 594 aa16.81■□□□□ 0.28
CDR2-207ENST00000569045 ZNF653Q96CK0 615 aa16.81■□□□□ 0.28
CDR2-207ENST00000569045 EXOC2Q96KP1 924 aa16.81■□□□□ 0.28
CDR2-207ENST00000569045 ZNF641Q96N77 438 aaPredicted RBP16.81■□□□□ 0.28
CDR2-207ENST00000569045 WRAP53Q9BUR4 548 aaKnown RBP16.81■□□□□ 0.28
CDR2-207ENST00000569045 LRRC19Q9H756 370 aa16.81■□□□□ 0.28
CDR2-207ENST00000569045 GPATCH2LQ9NWQ4 482 aa16.81■□□□□ 0.28
CDR2-207ENST00000569045 SPASTQ9UBP0 616 aa16.81■□□□□ 0.28
CDR2-207ENST00000569045 URB1O60287 2271 aaKnown RBP16.81■□□□□ 0.28
CDR2-207ENST00000569045 LAMA5O15230 3695 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 A0A1B0GTH6 734 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 K7ESM1 405 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 AQP9O43315 295 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 PRAMEF11O60813 436 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 PALMO75781 387 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 GP1BAP07359 652 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 TIMP2P16035 220 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 PAPOLAP51003 745 aaKnown RBP16.8■□□□□ 0.28
CDR2-207ENST00000569045 CLDN6P56747 220 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 PFN3P60673 137 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 INSM1Q01101 510 aaPredicted RBP16.8■□□□□ 0.28
CDR2-207ENST00000569045 SEMG2Q02383 582 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 CYTH1Q15438 398 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 LRRC73Q5JTD7 316 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 BRAT1Q6PJG6 821 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 RFX8Q6ZV50 586 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 ZNF571Q7Z3V5 609 aaPredicted RBP16.8■□□□□ 0.28
CDR2-207ENST00000569045 FAM181AQ8N9Y4 354 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 LMX1AQ8TE12 382 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 CENPTQ96BT3 561 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 CELF6Q96J87 481 aaKnown RBP16.8■□□□□ 0.28
CDR2-207ENST00000569045 APOLD1Q96LR9 279 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 TUBGCP5Q96RT8 1024 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 IL12RB2Q99665 862 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 SNRNP25Q9BV90 132 aaKnown RBP16.8■□□□□ 0.28
CDR2-207ENST00000569045 CINPQ9BW66 212 aaPredicted RBP16.8■□□□□ 0.28
CDR2-207ENST00000569045 SLC13A1Q9BZW2 595 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 SUV39H2Q9H5I1 410 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 ATP13A3Q9H7F0 1226 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 ZWILCHQ9H900 591 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 SP110Q9HB58 689 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 LHX3Q9UBR4 397 aa16.8■□□□□ 0.28
CDR2-207ENST00000569045 BZW2Q9Y6E2 419 aaKnown RBP16.8■□□□□ 0.28
CDR2-207ENST00000569045 TMEM110-MUSTN1A8MSY1 372 aa16.79■□□□□ 0.28
CDR2-207ENST00000569045 J3KR12 359 aa16.79■□□□□ 0.28
CDR2-207ENST00000569045 DFFAO00273 331 aa16.79■□□□□ 0.28
CDR2-207ENST00000569045 RRP8O43159 456 aaKnown RBP16.79■□□□□ 0.28
CDR2-207ENST00000569045 MT-CO3P00414 261 aa16.79■□□□□ 0.28
CDR2-207ENST00000569045 SERPINA4P29622 427 aa16.79■□□□□ 0.28
CDR2-207ENST00000569045 MIPP30301 263 aa16.79■□□□□ 0.28
CDR2-207ENST00000569045 RPIAP49247 311 aa16.79■□□□□ 0.28
CDR2-207ENST00000569045 BLKP51451 505 aa16.79■□□□□ 0.28
CDR2-207ENST00000569045 RFTN1Q14699 578 aaPredicted RBP16.79■□□□□ 0.28
CDR2-207ENST00000569045 RTP5Q14D33 572 aa16.79■□□□□ 0.28
CDR2-207ENST00000569045 ACAP1Q15027 740 aa16.79■□□□□ 0.28
CDR2-207ENST00000569045 KLHL40Q2TBA0 621 aa16.79■□□□□ 0.28
CDR2-207ENST00000569045 COL28A1Q2UY09 1125 aa16.79■□□□□ 0.28
CDR2-207ENST00000569045 TDRD12Q587J7 1177 aaKnown RBP16.79■□□□□ 0.28
CDR2-207ENST00000569045 FAXCQ5TGI0 409 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms