RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 SAP25Q8TEE9 199 aa17.74■□□□□ 0.43
EDC3-215ENST00000569007 CCDC42Q96M95 316 aa17.74■□□□□ 0.43
EDC3-215ENST00000569007 C1QTNF2Q9BXJ5 285 aa17.74■□□□□ 0.43
EDC3-215ENST00000569007 TRIM5Q9C035 493 aa17.74■□□□□ 0.43
EDC3-215ENST00000569007 NHEJ1Q9H9Q4 299 aaPredicted RBP17.74■□□□□ 0.43
EDC3-215ENST00000569007 SPTLC3Q9NUV7 552 aa17.74■□□□□ 0.43
EDC3-215ENST00000569007 FRYQ5TBA9 3013 aa17.74■□□□□ 0.43
EDC3-215ENST00000569007 AKAP13Q12802 2813 aa17.73■□□□□ 0.43
EDC3-215ENST00000569007 AKR1B15C9JRZ8 316 aaPredicted RBP17.73■□□□□ 0.43
EDC3-215ENST00000569007 RAD51BO15315 384 aa17.73■□□□□ 0.43
EDC3-215ENST00000569007 YKT6O15498 198 aa17.73■□□□□ 0.43
EDC3-215ENST00000569007 HYAL3O43820 417 aaPredicted RBP17.73■□□□□ 0.43
EDC3-215ENST00000569007 ITGAVP06756 1048 aa17.73■□□□□ 0.43
EDC3-215ENST00000569007 CD48P09326 243 aa17.73■□□□□ 0.43
EDC3-215ENST00000569007 TMEM253P0C7T8 217 aa17.73■□□□□ 0.43
EDC3-215ENST00000569007 ITIH2P19823 946 aa17.73■□□□□ 0.43
EDC3-215ENST00000569007 EPHA8P29322 1005 aaPredicted RBP17.73■□□□□ 0.43
EDC3-215ENST00000569007 GJC1P36383 396 aa17.73■□□□□ 0.43
EDC3-215ENST00000569007 RXRGP48443 463 aa17.73■□□□□ 0.43
EDC3-215ENST00000569007 SGCGQ13326 291 aa17.73■□□□□ 0.43
EDC3-215ENST00000569007 RFTN1Q14699 578 aaPredicted RBP17.73■□□□□ 0.43
EDC3-215ENST00000569007 INAVAQ3KP66 663 aa17.73■□□□□ 0.43
EDC3-215ENST00000569007 ATP13A4Q4VNC1 1196 aa17.73■□□□□ 0.43
EDC3-215ENST00000569007 ABI3BPQ7Z7G0 1075 aa17.73■□□□□ 0.43
EDC3-215ENST00000569007 ZSCAN30Q86W11 494 aa17.73■□□□□ 0.43
EDC3-215ENST00000569007 CNGA4Q8IV77 575 aa17.73■□□□□ 0.43
EDC3-215ENST00000569007 PNPLA1Q8N8W4 532 aa17.73■□□□□ 0.43
EDC3-215ENST00000569007 CINPQ9BW66 212 aaPredicted RBP17.73■□□□□ 0.43
EDC3-215ENST00000569007 SCNM1Q9BWG6 230 aa17.73■□□□□ 0.43
EDC3-215ENST00000569007 SUV39H2Q9H5I1 410 aa17.73■□□□□ 0.43
EDC3-215ENST00000569007 TMEM110-MUSTN1A8MSY1 372 aa17.72■□□□□ 0.43
EDC3-215ENST00000569007 BUB1BO60566 1050 aaPredicted RBP17.72■□□□□ 0.43
EDC3-215ENST00000569007 TRIM16O95361 564 aa17.72■□□□□ 0.43
EDC3-215ENST00000569007 ATXN1LP0C7T5 689 aaKnown RBP17.72■□□□□ 0.43
EDC3-215ENST00000569007 IL4RP24394 825 aa17.72■□□□□ 0.43
EDC3-215ENST00000569007 CSNK1DP48730 415 aa17.72■□□□□ 0.43
EDC3-215ENST00000569007 ARSEP51690 589 aa17.72■□□□□ 0.43
EDC3-215ENST00000569007 TAS2R40P59535 323 aa17.72■□□□□ 0.43
EDC3-215ENST00000569007 BNIP3Q12983 259 aa17.72■□□□□ 0.43
EDC3-215ENST00000569007 MMRN1Q13201 1228 aa17.72■□□□□ 0.43
EDC3-215ENST00000569007 GRM3Q14832 879 aa17.72■□□□□ 0.43
EDC3-215ENST00000569007 TMCO4Q5TGY1 634 aa17.72■□□□□ 0.43
EDC3-215ENST00000569007 SRLQ86TD4 932 aa17.72■□□□□ 0.43
EDC3-215ENST00000569007 SLCO6A1Q86UG4 719 aa17.72■□□□□ 0.43
EDC3-215ENST00000569007 CAMK1DQ8IU85 385 aa17.72■□□□□ 0.43
EDC3-215ENST00000569007 CHCHD4Q8N4Q1 142 aa17.72■□□□□ 0.43
EDC3-215ENST00000569007 FAM71BQ8TC56 605 aa17.72■□□□□ 0.43
EDC3-215ENST00000569007 BMFQ96LC9 184 aa17.72■□□□□ 0.43
EDC3-215ENST00000569007 ZNF641Q96N77 438 aaPredicted RBP17.72■□□□□ 0.43
EDC3-215ENST00000569007 CALN1Q9BXU9 219 aa17.72■□□□□ 0.43
EDC3-215ENST00000569007 RCOR3Q9P2K3 495 aaPredicted RBP17.72■□□□□ 0.43
EDC3-215ENST00000569007 APOBEC2Q9Y235 224 aaKnown RBP17.72■□□□□ 0.43
EDC3-215ENST00000569007 HS3ST3A1Q9Y663 406 aa17.72■□□□□ 0.43
EDC3-215ENST00000569007 IGF2RP11717 2491 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 TSPAN11A1L157 253 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 POM121BA6NF01 834 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 A6NNZ2 444 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 MUSKO15146 869 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 MMP20O60882 483 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 XPAP23025 273 aaPredicted RBP17.71■□□□□ 0.43
EDC3-215ENST00000569007 SERPINB6P35237 376 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 SLC10A7Q0GE19 358 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 DPYSL3Q14195 570 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 LBRQ14739 615 aaKnown RBP17.71■□□□□ 0.43
EDC3-215ENST00000569007 CFAP58Q5T655 872 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 Q6ZSR6 202 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 PTAR1Q7Z6K3 402 aaPredicted RBP17.71■□□□□ 0.43
EDC3-215ENST00000569007 RAB44Q7Z6P3 723 aaPredicted RBP17.71■□□□□ 0.43
EDC3-215ENST00000569007 SLC22A18ASQ8N1D0 253 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 HCAR2Q8TDS4 363 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 ASB12Q8WXK4 309 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 ZNF599Q96NL3 588 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 LENG8Q96PV6 779 aaPredicted RBP17.71■□□□□ 0.43
EDC3-215ENST00000569007 PSKH2Q96QS6 385 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 TUBGCP5Q96RT8 1024 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 KLF6Q99612 283 aaPredicted RBP17.71■□□□□ 0.43
EDC3-215ENST00000569007 WRAP53Q9BUR4 548 aaKnown RBP17.71■□□□□ 0.43
EDC3-215ENST00000569007 ATP13A3Q9H7F0 1226 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 KLHL11Q9NVR0 708 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 SEPT3Q9UH03 358 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 LCMT1Q9UIC8 334 aa17.71■□□□□ 0.43
EDC3-215ENST00000569007 GOLGA8CPA6NN73 597 aa17.7■□□□□ 0.42
EDC3-215ENST00000569007 TNFSF14O43557 240 aa17.7■□□□□ 0.42
EDC3-215ENST00000569007 MAFKO60675 156 aa17.7■□□□□ 0.42
EDC3-215ENST00000569007 SDC3O75056 442 aa17.7■□□□□ 0.42
EDC3-215ENST00000569007 PEX11BO96011 259 aa17.7■□□□□ 0.42
EDC3-215ENST00000569007 SERPINA4P29622 427 aa17.7■□□□□ 0.42
EDC3-215ENST00000569007 MAN1A1P33908 653 aa17.7■□□□□ 0.42
EDC3-215ENST00000569007 SUOXP51687 545 aa17.7■□□□□ 0.42
EDC3-215ENST00000569007 NSUN2Q08J23 767 aaKnown RBP eCLIP17.7■□□□□ 0.42
EDC3-215ENST00000569007 MESDQ14696 234 aa17.7■□□□□ 0.42
EDC3-215ENST00000569007 UGP2Q16851 508 aa17.7■□□□□ 0.42
EDC3-215ENST00000569007 BRAT1Q6PJG6 821 aa17.7■□□□□ 0.42
EDC3-215ENST00000569007 KYAT3Q6YP21 454 aaKnown RBP17.7■□□□□ 0.42
EDC3-215ENST00000569007 KANSL1Q7Z3B3 1105 aa17.7■□□□□ 0.42
EDC3-215ENST00000569007 ZSWIM9Q86XI8 627 aa17.7■□□□□ 0.42
EDC3-215ENST00000569007 ATPAF2Q8N5M1 289 aa17.7■□□□□ 0.42
EDC3-215ENST00000569007 EID2Q8N6I1 236 aa17.7■□□□□ 0.42
EDC3-215ENST00000569007 KCTD6Q8NC69 237 aa17.7■□□□□ 0.42
EDC3-215ENST00000569007 SLC35G2Q8TBE7 412 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms