RNA–Protein interactions for RNA: ENST00000568820.5

LYRM1-210, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-210ENST00000568820 CES3Q6UWW8 571 aa11.33□□□□□ -0.6
LYRM1-210ENST00000568820 STRA8Q7Z7C7 330 aa11.33□□□□□ -0.6
LYRM1-210ENST00000568820 HERC6Q8IVU3 1022 aa11.33□□□□□ -0.6
LYRM1-210ENST00000568820 POLR1EQ9GZS1 481 aaKnown RBP11.33□□□□□ -0.6
LYRM1-210ENST00000568820 NT5MQ9NPB1 228 aa11.33□□□□□ -0.6
LYRM1-210ENST00000568820 TCAF1Q9Y4C2 921 aa11.33□□□□□ -0.6
LYRM1-210ENST00000568820 ASB3Q9Y575 518 aa11.33□□□□□ -0.6
LYRM1-210ENST00000568820 USH1CQ9Y6N9 552 aa11.33□□□□□ -0.6
LYRM1-210ENST00000568820 HEATR9A2RTY3 570 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 TPP1O14773 563 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 PRAMEF11O60813 436 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 DCTN3O75935 186 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 FSBPO95073 299 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 TGDSO95455 350 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 MPOP05164 745 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 SLC10A7Q0GE19 358 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 TWF1Q12792 350 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 ILF2Q12905 390 aaKnown RBP11.32□□□□□ -0.6
LYRM1-210ENST00000568820 ZNF235Q14590 738 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 TEAD4Q15561 434 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 HSP90AA5PQ58FG0 334 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 ADGRF1Q5T601 910 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 DENND5AQ6IQ26 1287 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 CHST9Q7L1S5 443 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 CCDC91Q7Z6B0 441 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 SETD3Q86TU7 594 aaPredicted RBP11.32□□□□□ -0.6
LYRM1-210ENST00000568820 DENND1CQ8IV53 801 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.32□□□□□ -0.6
LYRM1-210ENST00000568820 ISL2Q96A47 359 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 RANBP9Q96S59 729 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 TSSK1BQ9BXA7 367 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 RXFP1Q9HBX9 757 aa11.32□□□□□ -0.6
LYRM1-210ENST00000568820 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.31□□□□□ -0.6
LYRM1-210ENST00000568820 TYW5A2RUC4 315 aaKnown RBP11.31□□□□□ -0.6
LYRM1-210ENST00000568820 TRIM43BA6NCK2 446 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 STC2O76061 302 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 GJB5O95377 273 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 ALDOAP04075 364 aaKnown RBP11.31□□□□□ -0.6
LYRM1-210ENST00000568820 CES1P23141 567 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 NMBRP28336 390 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 CORO1AP31146 461 aaKnown RBP11.31□□□□□ -0.6
LYRM1-210ENST00000568820 SERPINH1P50454 418 aaKnown RBP11.31□□□□□ -0.6
LYRM1-210ENST00000568820 GNA12Q03113 381 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 ACTN3Q08043 901 aaPredicted RBP11.31□□□□□ -0.6
LYRM1-210ENST00000568820 CCDC15Q0P6D6 951 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 ZNF177Q13360 481 aaPredicted RBP11.31□□□□□ -0.6
LYRM1-210ENST00000568820 RFTN1Q14699 578 aaPredicted RBP11.31□□□□□ -0.6
LYRM1-210ENST00000568820 POU6F1Q14863 301 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 SLC14A2Q15849 920 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 CCDC153Q494R4 210 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 FAM133BQ5BKY9 247 aaKnown RBP11.31□□□□□ -0.6
LYRM1-210ENST00000568820 KDELC1Q6UW63 502 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 CDHR3Q6ZTQ4 885 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 NLRP9Q7RTR0 991 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 DNAJB7Q7Z6W7 309 aaPredicted RBP11.31□□□□□ -0.6
LYRM1-210ENST00000568820 LCA5Q86VQ0 697 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 NUDCD3Q8IVD9 361 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 CNTN4Q8IWV2 1026 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 CALML6Q8TD86 181 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 ZDHHC1Q8WTX9 485 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 TRIM43Q96BQ3 446 aaPredicted RBP11.31□□□□□ -0.6
LYRM1-210ENST00000568820 ZNF419Q96HQ0 510 aaPredicted RBP11.31□□□□□ -0.6
LYRM1-210ENST00000568820 GAS2L1Q99501 681 aaPredicted RBP11.31□□□□□ -0.6
LYRM1-210ENST00000568820 FAM167BQ9BTA0 163 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 TRIM55Q9BYV6 548 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 TSPAN10Q9H1Z9 355 aaPredicted RBP11.31□□□□□ -0.6
LYRM1-210ENST00000568820 SLCO1B3Q9NPD5 702 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 IL23AQ9NPF7 189 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 IARS2Q9NSE4 1012 aaKnown RBP11.31□□□□□ -0.6
LYRM1-210ENST00000568820 INSL5Q9Y5Q6 135 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 PSAT1Q9Y617 370 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 ZFP37Q9Y6Q3 630 aaPredicted RBP11.31□□□□□ -0.6
LYRM1-210ENST00000568820 NUP205Q92621 2012 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 GREB1Q4ZG55 1949 aa11.31□□□□□ -0.6
LYRM1-210ENST00000568820 A0A1B0GVM2 712 aa11.3□□□□□ -0.6
LYRM1-210ENST00000568820 ILVBLA1L0T0 632 aa11.3□□□□□ -0.6
LYRM1-210ENST00000568820 TCAF2A6NFQ2 919 aa11.3□□□□□ -0.6
LYRM1-210ENST00000568820 ANKRD65E5RJM6 399 aa11.3□□□□□ -0.6
LYRM1-210ENST00000568820 H0YHG0 523 aa11.3□□□□□ -0.6
LYRM1-210ENST00000568820 PAPSS2O95340 614 aaPredicted RBP11.3□□□□□ -0.6
LYRM1-210ENST00000568820 EPOP01588 193 aa11.3□□□□□ -0.6
LYRM1-210ENST00000568820 DNAJB1P25685 340 aa11.3□□□□□ -0.6
LYRM1-210ENST00000568820 MSX1P28360 303 aa11.3□□□□□ -0.6
LYRM1-210ENST00000568820 SLC6A4P31645 630 aa11.3□□□□□ -0.6
LYRM1-210ENST00000568820 CD86P42081 329 aa11.3□□□□□ -0.6
LYRM1-210ENST00000568820 THOC5Q13769 683 aaKnown RBP11.3□□□□□ -0.6
LYRM1-210ENST00000568820 PDE1CQ14123 709 aaPredicted RBP11.3□□□□□ -0.6
LYRM1-210ENST00000568820 PCSK7Q16549 785 aa11.3□□□□□ -0.6
LYRM1-210ENST00000568820 IL31Q6EBC2 164 aa11.3□□□□□ -0.6
LYRM1-210ENST00000568820 KIAA0930Q6ICG6 404 aaPredicted RBP11.3□□□□□ -0.6
LYRM1-210ENST00000568820 FSTL4Q6MZW2 842 aa11.3□□□□□ -0.6
LYRM1-210ENST00000568820 CGB2Q6NT52 195 aa11.3□□□□□ -0.6
LYRM1-210ENST00000568820 ZNF783Q6ZMS7 281 aa11.3□□□□□ -0.6
LYRM1-210ENST00000568820 OTOAQ7RTW8 1153 aa11.3□□□□□ -0.6
LYRM1-210ENST00000568820 CIR1Q86X95 450 aaPredicted RBP11.3□□□□□ -0.6
LYRM1-210ENST00000568820 C1orf216Q8TAB5 229 aa11.3□□□□□ -0.6
LYRM1-210ENST00000568820 SREK1Q8WXA9 508 aaKnown RBP11.3□□□□□ -0.6
LYRM1-210ENST00000568820 E2F7Q96AV8 911 aa11.3□□□□□ -0.6
LYRM1-210ENST00000568820 IFT43Q96FT9 208 aa11.3□□□□□ -0.6
LYRM1-210ENST00000568820 TSNARE1Q96NA8 513 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms