RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169		D6RAR5	112 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	NVL	O15381	856 aa	Known RBP	11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	POP4	O95707	220 aa	Known RBP	11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	GSR	P00390	522 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	CELA2B	P08218	269 aa	Predicted RBP	11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	CCKBR	P32239	447 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	CDH5	P33151	784 aa	Predicted RBP	11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	CLCN1	P35523	988 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	FLT3	P36888	993 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	ACVRL1	P37023	503 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	ETFB	P38117	255 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	GABRB2	P47870	512 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	BLK	P51451	505 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	INHBC	P55103	352 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	CCL7	P80098	99 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	PAK1	Q13153	545 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	SRSF6	Q13247	344 aa	Known RBP	11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	TRNP1	Q6NT89	227 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	ATG14	Q6ZNE5	492 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	SLC47A2	Q86VL8	602 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	JAML	Q86YT9	394 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	DRC7	Q8IY82	874 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	SDR16C5	Q8N3Y7	309 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	RYBP	Q8N488	228 aa	Predicted RBP	11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	ARL10	Q8N8L6	244 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	TP53I13	Q8NBR0	393 aa	Predicted RBP	11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	OR2AP1	Q8NGE2	309 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	OR6K2	Q8NGY2	324 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	EXTL1	Q92935	676 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	CCDC74A	Q96AQ1	378 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	TMEM74	Q96NL1	305 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	GFM1	Q96RP9	751 aa	Known RBP	11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	SEMA3C	Q99985	751 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	C1QTNF7	Q9BXJ2	289 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	FOXP3	Q9BZS1	431 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	STRADB	Q9C0K7	418 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	EPB41L5	Q9HCM4	733 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	PLCB1	Q9NQ66	1216 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	MBNL1	Q9NR56	388 aa	Known RBP	11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	PPARGC1A	Q9UBK2	798 aa	Known RBP	11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	GULP1	Q9UBP9	304 aa		11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	ZFC3H1	O60293	1989 aa	Known RBP	11.54	□□□□□ -0.56
TCF4-238	ENST00000568169	GTPBP10	A4D1E9	387 aa	Known RBP	11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	FOXN3	O00409	490 aa	Predicted RBP	11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	KRIT1	O00522	736 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	SUV39H1	O43463	412 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	MMP20	O60882	483 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	TM7SF2	O76062	418 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	UGT2B4	P06133	528 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	LIPC	P11150	499 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	SFTPC	P11686	197 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	HGF	P14210	728 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	PON1	P27169	355 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	HK3	P52790	923 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	GEMIN4	P57678	1058 aa	Known RBP	11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	SNRPD1	P62314	119 aa	Known RBP	11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	NFKB2	Q00653	900 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	ELOC	Q15369	112 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	MYLK3	Q32MK0	819 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	GBP6	Q6ZN66	633 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	TTC7B	Q86TV6	843 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	KY	Q8NBH2	561 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	PCDH19	Q8TAB3	1148 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	SCG3	Q8WXD2	468 aa	Known RBP	11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	ARHGEF2	Q92974	986 aa	Known RBP	11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	C18orf8	Q96DM3	657 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	KLHL32	Q96NJ5	620 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	EPAS1	Q99814	870 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	ARHGAP9	Q9BRR9	750 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	OSBPL1A	Q9BXW6	950 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	EDEM3	Q9BZQ6	932 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	LRRN3	Q9H3W5	708 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	OCEL1	Q9H607	264 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	SIX2	Q9NPC8	291 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	WDR70	Q9NW82	654 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	AJAP1	Q9UKB5	411 aa	Predicted RBP	11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	DOLK	Q9UPQ8	538 aa		11.53	□□□□□ -0.56
TCF4-238	ENST00000568169	TMEM110-MUSTN1	A8MSY1	372 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	RASGRP1	O95267	797 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	FGFR1OP	O95684	399 aa	Known RBP	11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	RPLP0	P05388	317 aa	Known RBP	11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	ALPI	P09923	528 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	FAM87A	P0C7U9	286 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	PEX5	P50542	639 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	NRG1	Q02297	640 aa	Predicted RBP	11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	ZFP36L1	Q07352	338 aa	Known RBP	11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	POLD3	Q15054	466 aa	Predicted RBP	11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	IRF4	Q15306	451 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	EXOC3L4	Q17RC7	722 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	ALG11	Q2TAA5	492 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	KLHL40	Q2TBA0	621 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	LRRC73	Q5JTD7	316 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	COLEC12	Q5KU26	742 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	FAM102A	Q5T9C2	384 aa	Predicted RBP	11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	MANEAL	Q5VSG8	457 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	GDPD4	Q6W3E5	623 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	ARC	Q7LC44	396 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	FAM131B	Q86XD5	332 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	XYLT1	Q86Y38	959 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	HID1	Q8IV36	788 aa		11.52	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms