RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 POLR2LP62875 67 aaKnown RBP12.3□□□□□ -0.44
SF3B3-208ENST00000567250 ELP6Q0PNE2 266 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 ZBTB17Q13105 803 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 SLC14A2Q15849 920 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 TEX44Q53QW1 395 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 SYCP2LQ5T4T6 812 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 PIP5KL1Q5T9C9 394 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 LYSMD4Q5XG99 296 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 ITPRIPL1Q6GPH6 555 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 DARS2Q6PI48 645 aaKnown RBP12.3□□□□□ -0.44
SF3B3-208ENST00000567250 NCEH1Q6PIU2 408 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.3□□□□□ -0.44
SF3B3-208ENST00000567250 NDUFAF2Q8N183 169 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 PGBD5Q8N414 524 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 FAM160A2Q8N612 972 aaPredicted RBP12.3□□□□□ -0.44
SF3B3-208ENST00000567250 OR14C36Q8NHC7 312 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 ARRDC3Q96B67 414 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 PPP1R2P1Q96PQ5 205 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 NAPGQ99747 312 aaPredicted RBP12.3□□□□□ -0.44
SF3B3-208ENST00000567250 GPR174Q9BXC1 333 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 DUSP15Q9H1R2 295 aaPredicted RBP12.3□□□□□ -0.44
SF3B3-208ENST00000567250 NEUROG2Q9H2A3 272 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 SUV39H2Q9H5I1 410 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 KLHL8Q9P2G9 620 aaPredicted RBP12.3□□□□□ -0.44
SF3B3-208ENST00000567250 SERGEFQ9UGK8 458 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 MBD1Q9UIS9 605 aaPredicted RBP12.3□□□□□ -0.44
SF3B3-208ENST00000567250 TRHDEQ9UKU6 1024 aa12.3□□□□□ -0.44
SF3B3-208ENST00000567250 BCLAF3A2AJT9 711 aaKnown RBP12.29□□□□□ -0.44
SF3B3-208ENST00000567250 FAM47DPA6NHR8 397 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 C16orf96A6NNT2 1141 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 PGRMC1O00264 195 aaKnown RBP12.29□□□□□ -0.44
SF3B3-208ENST00000567250 KCNN4O15554 427 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 AP1G1O43747 822 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 FGGP02679 453 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 TCP1P17987 556 aaKnown RBP12.29□□□□□ -0.44
SF3B3-208ENST00000567250 PTPN3P26045 913 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 GKP32189 559 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 NUDT1P36639 197 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 TNNT3P45378 269 aaPredicted RBP12.29□□□□□ -0.44
SF3B3-208ENST00000567250 DHPSP49366 369 aaPredicted RBP12.29□□□□□ -0.44
SF3B3-208ENST00000567250 METAP1P53582 386 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 LONRF2Q1L5Z9 754 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 WDR45BQ5MNZ6 344 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 ERAP2Q6P179 960 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 NEK5Q6P3R8 708 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 CYP2U1Q7Z449 544 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 RABEPKQ7Z6M1 372 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 LRRN4Q8WUT4 740 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 ZNF419Q96HQ0 510 aaPredicted RBP12.29□□□□□ -0.44
SF3B3-208ENST00000567250 HSPA12BQ96MM6 686 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 OSBPL9Q96SU4 736 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 HOMER3Q9NSC5 361 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 NCDNQ9UBB6 729 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 SUSD2Q9UGT4 822 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 SNX12Q9UMY4 172 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 ATP8A1Q9Y2Q0 1164 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 PCDHGA5Q9Y5G8 931 aa12.29□□□□□ -0.44
SF3B3-208ENST00000567250 TP53BP1Q12888 1972 aaPredicted RBP12.29□□□□□ -0.44
SF3B3-208ENST00000567250 PLXNA2O75051 1894 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 TBC1D3DA0A087WVF3 549 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 TBC1D3IA0A087WXS9 549 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 TBC1D3EA0A087X179 549 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 TBC1D3KA0A087X1G2 549 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 GOLGA6L10A0A0M3HER8 536 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 CTAGE9A4FU28 777 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 TBC1D3FA6NER0 549 aaPredicted RBP12.28□□□□□ -0.44
SF3B3-208ENST00000567250 UPK3BL1B0FP48 263 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 TBC1D3LB9A6J9 549 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 UPK3BL2E5RIL1 263 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 NEMP1O14524 444 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 TSPAN6O43657 245 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 EPN2O95208 641 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 CPP00450 1065 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 TBC1D3HP0C7X1 549 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 RBL1P28749 1068 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 CXCR5P32302 372 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 HOXD12P35452 270 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 ACTN2P35609 894 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 DSC2Q02487 901 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 ARMC12Q5T9G4 340 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 KIAA0895LQ68EN5 471 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 TBC1D3GQ6DHY5 549 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 TBC1D3CQ6IPX1 549 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 KIAA1161Q6NSJ0 714 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 TRIM69Q86WT6 500 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 TMEFF1Q8IYR6 380 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 TBC1D3Q8IZP1 549 aaPredicted RBP12.28□□□□□ -0.44
SF3B3-208ENST00000567250 RASGEF1CQ8N431 466 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 FRMD1Q8N878 549 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 SLC35B2Q8TB61 432 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 PDCD6IPQ8WUM4 868 aaKnown RBP12.28□□□□□ -0.44
SF3B3-208ENST00000567250 SNX19Q92543 992 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 LRRC45Q96CN5 670 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 ECHDC3Q96DC8 303 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 TEKT5Q96M29 485 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 AGAP3Q96P47 875 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 TDRD1Q9BXT4 1180 aaKnown RBP12.28□□□□□ -0.44
SF3B3-208ENST00000567250 CEP41Q9BYV8 373 aa12.28□□□□□ -0.44
SF3B3-208ENST00000567250 SLC25A51Q9H1U9 297 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms