RNA–Protein interactions for RNA: ENST00000566658.1

SNAPC5-207, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene SNAPC5, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-207ENST00000566658 UBA2Q9UBT2 640 aaPredicted RBP12.37□□□□□ -0.43
SNAPC5-207ENST00000566658 KLF15Q9UIH9 416 aa12.37□□□□□ -0.43
SNAPC5-207ENST00000566658 PNMA8BQ9ULN7 279 aaPredicted RBP12.37□□□□□ -0.43
SNAPC5-207ENST00000566658 HS3ST3A1Q9Y663 406 aa12.37□□□□□ -0.43
SNAPC5-207ENST00000566658 SCINQ9Y6U3 715 aa12.37□□□□□ -0.43
SNAPC5-207ENST00000566658 TSPAN11A1L157 253 aa12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 TMEM8BA6NDV4 472 aa12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 SRRM3A6NNA2 597 aaPredicted RBP12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 A6NNZ2 444 aa12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 MUSKO15146 869 aa12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 TSPAN6O43657 245 aa12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 PRPSAP2O60256 369 aa12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 MAGEC1O60732 1142 aa12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 SERPING1P05155 500 aa12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 DGKAP23743 735 aa12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 PCK1P35558 622 aa12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 HCAR3P49019 387 aa12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 SLC25A11Q02978 314 aaKnown RBP12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 DPYSL2Q16555 572 aa12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 SMTNL2Q2TAL5 461 aa12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 INAVAQ3KP66 663 aa12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 TDRD12Q587J7 1177 aaKnown RBP12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 ZNF542PQ5EBM4 170 aa12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 PPP6R3Q5H9R7 873 aaPredicted RBP12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 PSTKQ8IV42 348 aaKnown RBP12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 CENPTQ96BT3 561 aa12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 TRIM11Q96F44 468 aa12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 CALN1Q9BXU9 219 aa12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 XPO4Q9C0E2 1151 aaKnown RBP12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 COL27A1Q8IZC6 1860 aaPredicted RBP12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 APC2O95996 2303 aa12.36□□□□□ -0.43
SNAPC5-207ENST00000566658 LRP4O75096 1905 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 LY6G6EA0A0G2JKS1 128 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 SPTY2D1-AS1A0A0U1RR47 76 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 SIGLEC6O43699 453 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 MMP20O60882 483 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 PIAS2O75928 621 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 RNF8O76064 485 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 LDOC1O95751 146 aaPredicted RBP12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 PEX11BO96011 259 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 CYP1A2P05177 515 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 RARAP10276 462 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 CASP14P31944 242 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 IGFALSP35858 605 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 PFN3P60673 137 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 CCDC157Q569K6 752 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 POLNQ7Z5Q5 900 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 PTAR1Q7Z6K3 402 aaPredicted RBP12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 NIPA2Q8N8Q9 360 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 TP53I13Q8NBR0 393 aaPredicted RBP12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 TSEN2Q8NCE0 465 aaKnown RBP12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 ASB12Q8WXK4 309 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 MRPL47Q9HD33 250 aaKnown RBP12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 MBNL1Q9NR56 388 aaKnown RBP12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 PCDHGA1Q9Y5H4 931 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 BZW2Q9Y6E2 419 aaKnown RBP12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 U3KQA8 63 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 MYLKQ15746 1914 aa12.35□□□□□ -0.43
SNAPC5-207ENST00000566658 GOLGA4Q13439 2230 aaKnown RBP12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 ARHGAP42A6NI28 874 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 DFFAO00273 331 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 RFPL3O75679 317 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 PRKCGP05129 697 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 DESP17661 470 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 AMPD1P23109 780 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 IL4RP24394 825 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 HNRNPH3P31942 346 aaKnown RBP12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 TPM4P67936 248 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 SEMG2Q02383 582 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 EIF2B5Q13144 721 aaKnown RBP12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 ACAP1Q15027 740 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 ASTE1Q2TB18 679 aaPredicted RBP12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 TMEM52BQ4KMG9 183 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 NYAP1Q6ZVC0 841 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 TTC7BQ86TV6 843 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 ZSCAN30Q86W11 494 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 PROSER1Q86XN7 944 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 CAMK1DQ8IU85 385 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 DENND6BQ8NEG7 585 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 OR4C6Q8NH72 309 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 MDM1Q8TC05 714 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 IFT43Q96FT9 208 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 CSPG4P5Q96PW8 444 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 WRAP53Q9BUR4 548 aaKnown RBP12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 NUP85Q9BW27 656 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 SUV39H2Q9H5I1 410 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 ZWILCHQ9H900 591 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 RALYQ9UKM9 306 aaKnown RBP12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 COQ6Q9Y2Z9 468 aa12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 LUC7L2Q9Y383 392 aaKnown RBP12.34□□□□□ -0.43
SNAPC5-207ENST00000566658 TTC24A2A3L6 582 aaPredicted RBP12.33□□□□□ -0.44
SNAPC5-207ENST00000566658 GOLGA6L19H0YKK7 550 aa12.33□□□□□ -0.44
SNAPC5-207ENST00000566658 NEMP1O14524 444 aa12.33□□□□□ -0.44
SNAPC5-207ENST00000566658 FFAR2O15552 330 aa12.33□□□□□ -0.44
SNAPC5-207ENST00000566658 DAPK3O43293 454 aa12.33□□□□□ -0.44
SNAPC5-207ENST00000566658 NEBLO76041 1014 aa12.33□□□□□ -0.44
SNAPC5-207ENST00000566658 CSF2P04141 144 aa12.33□□□□□ -0.44
SNAPC5-207ENST00000566658 CD48P09326 243 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms