RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 MMP9P14780 707 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 ZNF20P17024 532 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 TMEM11P17152 192 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 CTPS1P17812 591 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 TRIM21P19474 475 aaKnown RBP3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 AGAP20933 346 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 MMP8P22894 467 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 GCSHP23434 173 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 DNASE1P24855 282 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 PTPN3P26045 913 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 PON1P27169 355 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 HOXC8P31273 242 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 HSPA4P34932 840 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 CNR2P34972 360 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 PRPHP41219 470 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 RABIFP47224 123 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 CLK3P49761 638 aaKnown RBP3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 RAB28P51157 221 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 CLCN3P51790 818 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 HGFACQ04756 655 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 MZT1Q08AG7 82 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 NPRL3Q12980 569 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 TUBB3Q13509 450 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 CAPSQ13938 189 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 RRS1Q15050 365 aaKnown RBP3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 GPR162Q16538 588 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 FAM187BQ17R55 369 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 C15orf59Q2T9L4 293 aaPredicted RBP3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 MAJINQ3KP22 176 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 LEXMQ3ZCV2 418 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 ANKRD20A4Q4UJ75 823 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 SLC39A12Q504Y0 691 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 ANKRD20A8PQ5CZ79 823 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 ARL13AQ5H913 290 aaPredicted RBP3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 COLEC12Q5KU26 742 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 ANKRD20A2Q5SQ80 823 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 ANKRD20A1Q5TYW2 823 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 ANKRD20A3Q5VUR7 823 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 ATG9BQ674R7 924 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 SFRP4Q6FHJ7 346 aaPredicted RBP3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 ETFRF1Q6IPR1 90 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 GJB7Q6PEY0 223 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 FOXR2Q6PJQ5 311 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 KDELC1Q6UW63 502 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 C17orf99Q6UX52 265 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 GBP6Q6ZN66 633 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 RBPMS2Q6ZRY4 209 aaKnown RBP3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 RABEPKQ7Z6M1 372 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 ZER1Q7Z7L7 766 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 DSG4Q86SJ6 1040 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 FAM83AQ86UY5 434 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 ANKRD13BQ86YJ7 626 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 REXO1L1PQ8IX06 675 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 SIRT6Q8N6T7 355 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 SLC4A11Q8NBS3 891 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 ATAD1Q8NBU5 361 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 C11orf65Q8NCR3 313 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 BEND2Q8NDZ0 799 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 SPATA18Q8TC71 538 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 XAGE5Q8WWM1 108 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 SNX19Q92543 992 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 CORO2AQ92828 525 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 GLG1Q92896 1179 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 BICD1Q96G01 975 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 WDYHV1Q96HA8 205 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 PDLIM5Q96HC4 596 aaKnown RBP3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 TMEM176AQ96HP8 235 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 HES6Q96HZ4 224 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 VPS39Q96JC1 886 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 CFAP57Q96MR6 1250 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 GDAP1L1Q96MZ0 367 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 BBS4Q96RK4 519 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 SPATA25Q9BR10 227 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 C1QTNF3Q9BXJ4 246 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 GLIS2Q9BZE0 524 aaPredicted RBP3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 TPSD1Q9BZJ3 242 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 GLOD4Q9HC38 313 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 MBNL1Q9NR56 388 aaKnown RBP3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 ANO10Q9NW15 660 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 WSB2Q9NYS7 404 aaPredicted RBP3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 PLK2Q9NYY3 685 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 ZNF624Q9P2J8 865 aaPredicted RBP3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 UPB1Q9UBR1 384 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 CCNL1Q9UK58 526 aaPredicted RBP3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 A4GNTQ9UNA3 340 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 AURKCQ9UQB9 309 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 CHKBQ9Y259 395 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 PMF1-BGLAPU3KQ54 211 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 ATP8B3O60423 1300 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 LOC100509620A0A075B734 347 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 SYNJ2BP-COX16A0A087WUM0 186 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 EDDM13A0A1B0GTR0 161 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 FAM90A8PA6NJQ4 464 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 K7EPI3 171 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 PSMD14O00487 310 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 PAPSS1O43252 624 aaPredicted RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 TRIAP1O43715 76 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 TLR2O60603 784 aa3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 NOL3O60936 208 aaKnown RBP3.42□□□□□ -1.86
HERPUD1-211ENST00000566550 MITFO75030 526 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms