RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 CXCR5P32302 372 aa10.84□□□□□ -0.67
UBFD1-205ENST00000566136 HADHBP55084 474 aaKnown RBP10.84□□□□□ -0.67
UBFD1-205ENST00000566136 PRKCZQ05513 592 aa10.84□□□□□ -0.67
UBFD1-205ENST00000566136 ARHGEF6Q15052 776 aa10.84□□□□□ -0.67
UBFD1-205ENST00000566136 INAQ16352 499 aa10.84□□□□□ -0.67
UBFD1-205ENST00000566136 CYP2A13Q16696 494 aa10.84□□□□□ -0.67
UBFD1-205ENST00000566136 KNOP1Q1ED39 458 aaKnown RBP10.84□□□□□ -0.67
UBFD1-205ENST00000566136 ASTE1Q2TB18 679 aaPredicted RBP10.84□□□□□ -0.67
UBFD1-205ENST00000566136 AADACL4Q5VUY2 407 aa10.84□□□□□ -0.67
UBFD1-205ENST00000566136 KSR1Q8IVT5 923 aa10.84□□□□□ -0.67
UBFD1-205ENST00000566136 SLC7A5P1Q8MH63 180 aa10.84□□□□□ -0.67
UBFD1-205ENST00000566136 FAM133AQ8N9E0 248 aa10.84□□□□□ -0.67
UBFD1-205ENST00000566136 CHURC1Q8WUH1 139 aa10.84□□□□□ -0.67
UBFD1-205ENST00000566136 ELP4Q96EB1 424 aa10.84□□□□□ -0.67
UBFD1-205ENST00000566136 CORO1BQ9BR76 489 aa10.84□□□□□ -0.67
UBFD1-205ENST00000566136 MAGEB5Q9BZ81 275 aa10.84□□□□□ -0.67
UBFD1-205ENST00000566136 UBXN6Q9BZV1 441 aa10.84□□□□□ -0.67
UBFD1-205ENST00000566136 EVA1AQ9H8M9 152 aa10.84□□□□□ -0.67
UBFD1-205ENST00000566136 SLAMF7Q9NQ25 335 aa10.84□□□□□ -0.67
UBFD1-205ENST00000566136 EHD2Q9NZN4 543 aa10.84□□□□□ -0.67
UBFD1-205ENST00000566136 PKD2L1Q9P0L9 805 aa10.84□□□□□ -0.67
UBFD1-205ENST00000566136 PADI1Q9ULC6 663 aa10.84□□□□□ -0.67
UBFD1-205ENST00000566136 COL2A1P02458 1487 aaPredicted RBP10.83□□□□□ -0.68
UBFD1-205ENST00000566136 BTN3A1O00481 513 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 FPR2P25090 351 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 CASP4P49662 377 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 ETV1P50549 477 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 PMS2P54278 862 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 GMFBP60983 142 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 MRPS25P82663 173 aaKnown RBP10.83□□□□□ -0.68
UBFD1-205ENST00000566136 SLC6A3Q01959 620 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 SPEM2Q0P670 501 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 TARDBPQ13148 414 aaKnown RBP eCLIP10.83□□□□□ -0.68
UBFD1-205ENST00000566136 SLBPQ14493 270 aaKnown RBP eCLIP10.83□□□□□ -0.68
UBFD1-205ENST00000566136 BAK1Q16611 211 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 EDRF1Q3B7T1 1238 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 SLC9C1Q4G0N8 1177 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 RINT1Q6NUQ1 792 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 MRPL41Q8IXM3 137 aaKnown RBP10.83□□□□□ -0.68
UBFD1-205ENST00000566136 ZC3H3Q8IXZ2 948 aaKnown RBP10.83□□□□□ -0.68
UBFD1-205ENST00000566136 GSPT2Q8IYD1 628 aaKnown RBP10.83□□□□□ -0.68
UBFD1-205ENST00000566136 TRIM58Q8NG06 486 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 CLPTM1LQ96KA5 538 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 ZFYVE21Q9BQ24 234 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.83□□□□□ -0.68
UBFD1-205ENST00000566136 MID2Q9UJV3 735 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 CAB39Q9Y376 341 aaPredicted RBP10.83□□□□□ -0.68
UBFD1-205ENST00000566136 KPNA7A9QM74 516 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 FAM47E-STBD1D6RA91 191 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 CTDSP2O14595 271 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 MAP2K7O14733 419 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 AKAP3O75969 853 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 ARP10275 920 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 CPB1P15086 417 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 PTAFRP25105 342 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 MCM3P25205 808 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 NMT1P30419 496 aaKnown RBP10.83□□□□□ -0.68
UBFD1-205ENST00000566136 MAGEA4P43358 317 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 DNA2P51530 1060 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 SP3Q02447 781 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 CKAP4Q07065 602 aaKnown RBP10.83□□□□□ -0.68
UBFD1-205ENST00000566136 SPDYCQ5MJ68 293 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 TCERG1LQ5VWI1 586 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 MON1AQ86VX9 555 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 DENND6BQ8NEG7 585 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 FCRL3Q96P31 734 aaPredicted RBP10.83□□□□□ -0.68
UBFD1-205ENST00000566136 GANQ9H2C0 597 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 SLC32A1Q9H598 525 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 FSCN3Q9NQT6 498 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 ARMCX3Q9UH62 379 aaPredicted RBP10.83□□□□□ -0.68
UBFD1-205ENST00000566136 USP18Q9UMW8 372 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 SNX12Q9UMY4 172 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 ASTN1O14525 1302 aa10.83□□□□□ -0.68
UBFD1-205ENST00000566136 GSAPA4D1B5 854 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 BTBD19C9JJ37 291 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 MTX2O75431 263 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 SLITRK3O94933 977 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 OR2C1O95371 312 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 PDGFBP01127 241 aaPredicted RBP10.82□□□□□ -0.68
UBFD1-205ENST00000566136 NR3C1P04150 777 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 SERPING1P05155 500 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 IRAK1P51617 712 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 SOX8P57073 446 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 LACTBP83111 547 aaPredicted RBP10.82□□□□□ -0.68
UBFD1-205ENST00000566136 PPIL2Q13356 520 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 RPS6KA2Q15349 733 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 HADHQ16836 314 aaKnown RBP10.82□□□□□ -0.68
UBFD1-205ENST00000566136 ARHGAP44Q17R89 818 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 ZC2HC1CQ53FD0 456 aaPredicted RBP10.82□□□□□ -0.68
UBFD1-205ENST00000566136 KIAA0408Q6ZU52 694 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 CUZD1Q86UP6 607 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 DNAAF5Q86Y56 855 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 CCDC28AQ8IWP9 274 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 IL17RCQ8NAC3 791 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 KDM1BQ8NB78 822 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 OR6Y1Q8NGX8 325 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 SYTL5Q8TDW5 730 aaPredicted RBP10.82□□□□□ -0.68
UBFD1-205ENST00000566136 MRGPRX2Q96LB1 330 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 HSD17B14Q9BPX1 270 aa10.82□□□□□ -0.68
UBFD1-205ENST00000566136 TRIM54Q9BYV2 358 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms