RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 ZNF574Q6ZN55 896 aaPredicted RBP12.94□□□□□ -0.34
RNF40-208ENST00000565995 DTX1Q86Y01 620 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 TP53I13Q8NBR0 393 aaPredicted RBP12.94□□□□□ -0.34
RNF40-208ENST00000565995 SCG3Q8WXD2 468 aaKnown RBP12.94□□□□□ -0.34
RNF40-208ENST00000565995 EXTL1Q92935 676 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 TMEM74Q96NL1 305 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 GFM1Q96RP9 751 aaKnown RBP12.94□□□□□ -0.34
RNF40-208ENST00000565995 OSBPL1AQ9BXW6 950 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 ZYG11BQ9C0D3 744 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 ZDHHC6Q9H6R6 413 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 APEX2Q9UBZ4 518 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 HOOK1Q9UJC3 728 aaKnown RBP12.94□□□□□ -0.34
RNF40-208ENST00000565995 MAN1B1Q9UKM7 699 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 SNX10Q9Y5X0 201 aa12.94□□□□□ -0.34
RNF40-208ENST00000565995 TM7SF2O76062 418 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 POP4O95707 220 aaKnown RBP12.93□□□□□ -0.34
RNF40-208ENST00000565995 ALPIP09923 528 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 PNLIPP16233 465 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 CLCN1P35523 988 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 HK3P52790 923 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 GEMIN4P57678 1058 aaKnown RBP12.93□□□□□ -0.34
RNF40-208ENST00000565995 CCL7P80098 99 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 NRG1Q02297 640 aaPredicted RBP12.93□□□□□ -0.34
RNF40-208ENST00000565995 PTK2Q05397 1052 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 DEUP1Q05D60 604 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 AGERQ15109 404 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 KLHL40Q2TBA0 621 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 CAVIN1Q6NZI2 390 aaKnown RBP12.93□□□□□ -0.34
RNF40-208ENST00000565995 GJB7Q6PEY0 223 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 OGFOD3Q6PK18 319 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 ARCQ7LC44 396 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 PASD1Q8IV76 773 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 OR2AP1Q8NGE2 309 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 NELFBQ8WX92 580 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 ARHGEF2Q92974 986 aaKnown RBP12.93□□□□□ -0.34
RNF40-208ENST00000565995 CCDC74AQ96AQ1 378 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 TBCBQ99426 244 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 ARHGAP9Q9BRR9 750 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 SPON2Q9BUD6 331 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 EDEM3Q9BZQ6 932 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 NUP62CLQ9H1M0 184 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 LRRN3Q9H3W5 708 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 MBNL1Q9NR56 388 aaKnown RBP12.93□□□□□ -0.34
RNF40-208ENST00000565995 TMPRSS4Q9NRS4 437 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 SEPT10Q9P0V9 454 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 APPL1Q9UKG1 709 aa12.93□□□□□ -0.34
RNF40-208ENST00000565995 FCF1Q9Y324 198 aaKnown RBP12.93□□□□□ -0.34
RNF40-208ENST00000565995 A0A1W2PQC6 194 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 GTPBP10A4D1E9 387 aaKnown RBP12.92□□□□□ -0.34
RNF40-208ENST00000565995 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.92□□□□□ -0.34
RNF40-208ENST00000565995 NEMP1O14524 444 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 SRGAP2O75044 1071 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 CELA2BP08218 269 aaPredicted RBP12.92□□□□□ -0.34
RNF40-208ENST00000565995 SLC9A1P19634 815 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 CD82P27701 267 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 ETFBP38117 255 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 SULT1E1P49888 294 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 DNA2P51530 1060 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 SNRPD1P62314 119 aaKnown RBP12.92□□□□□ -0.34
RNF40-208ENST00000565995 SRSF6Q13247 344 aaKnown RBP12.92□□□□□ -0.34
RNF40-208ENST00000565995 MORC3Q14149 939 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 TBR1Q16650 682 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 ARHGAP44Q17R89 818 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 MYLK3Q32MK0 819 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 LURAP1LQ8IV03 231 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 KYQ8NBH2 561 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 GPR156Q8NFN8 814 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 HCAR2Q8TDS4 363 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 C1QTNF7Q9BXJ2 289 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 TRIM4Q9C037 500 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 EPB41L5Q9HCM4 733 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 GEMIN8Q9NWZ8 242 aaKnown RBP12.92□□□□□ -0.34
RNF40-208ENST00000565995 DKK3Q9UBP4 350 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 ITM2BQ9Y287 266 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 MFHAS1Q9Y4C4 1052 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 PCDHGA4Q9Y5G9 962 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 ACTL7AQ9Y615 435 aa12.92□□□□□ -0.34
RNF40-208ENST00000565995 NTRK1P04629 796 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 FAM87AP0C7U9 286 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 GKP32189 559 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 KRT9P35527 623 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 USP8P40818 1118 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 MAPKAPK2P49137 400 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 SUOXP51687 545 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 CAMK4Q16566 473 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 TMEM52BQ4KMG9 183 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 MANEALQ5VSG8 457 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 ISM2Q6H9L7 571 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 GDPD4Q6W3E5 623 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 TTC7BQ86TV6 843 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 VPS36Q86VN1 386 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 NLRP14Q86W24 1093 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 GKN2Q86XP6 184 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 ZSCAN1Q8NBB4 408 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 PCDH19Q8TAB3 1148 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 KLHL32Q96NJ5 620 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 EPAS1Q99814 870 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 CRACR2AQ9BSW2 395 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 FOXP3Q9BZS1 431 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 TM6SF2Q9BZW4 377 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms