RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 YPEL5P62699 121 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 GABREP78334 506 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 SYCP1Q15431 976 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 CYTH1Q15438 398 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 CDKN3Q16667 212 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 ISXQ2M1V0 245 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 DEFB133Q30KQ1 61 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 PRRT3Q5FWE3 981 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 LRRC73Q5JTD7 316 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 PERM1Q5SV97 790 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 PPP1R15BQ5SWA1 713 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 IGF2-ASQ6U949 168 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 CLEC17AQ6ZS10 378 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 RBM43Q6ZSC3 357 aaKnown RBP8.69□□□□□ -1.02
CAPN3-213ENST00000565173 MON1BQ7L1V2 547 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 APTXQ7Z2E3 356 aaKnown RBP8.69□□□□□ -1.02
CAPN3-213ENST00000565173 EFL1Q7Z2Z2 1120 aaKnown RBP8.69□□□□□ -1.02
CAPN3-213ENST00000565173 SLFN11Q7Z7L1 901 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 VPS36Q86VN1 386 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 TP53I13Q8NBR0 393 aaPredicted RBP8.69□□□□□ -1.02
CAPN3-213ENST00000565173 LSM14AQ8ND56 463 aaKnown RBP8.69□□□□□ -1.02
CAPN3-213ENST00000565173 C3orf20Q8ND61 904 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 ZNF248Q8NDW4 579 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 MAPK15Q8TD08 544 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 LMX1AQ8TE12 382 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 CASKIN2Q8WXE0 1202 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 ARHGEF26Q96DR7 871 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 HMCESQ96FZ2 354 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 PRR11Q96HE9 360 aaPredicted RBP8.69□□□□□ -1.02
CAPN3-213ENST00000565173 NAF1Q96HR8 494 aaKnown RBP8.69□□□□□ -1.02
CAPN3-213ENST00000565173 TBATAQ96M53 351 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 CPEB1Q9BZB8 566 aaKnown RBP8.69□□□□□ -1.02
CAPN3-213ENST00000565173 ABCG4Q9H172 646 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 NCKIPSDQ9NZQ3 722 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 DKK3Q9UBP4 350 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 IPO11Q9UI26 975 aaKnown RBP8.69□□□□□ -1.02
CAPN3-213ENST00000565173 FZD10Q9ULW2 581 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 DAAM1Q9Y4D1 1078 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 ASH1LQ9NR48 2969 aaKnown RBP8.69□□□□□ -1.02
CAPN3-213ENST00000565173 TEX51A0A1B0GUA7 166 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 CPED1A4D0V7 1026 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 ZSCAN5CA6NGD5 496 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-213ENST00000565173 EIF4E1BA6NMX2 242 aaKnown RBP8.68□□□□□ -1.02
CAPN3-213ENST00000565173 RASA4BC9J798 803 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 NEMP1O14524 444 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 RIOK3O14730 519 aaKnown RBP8.68□□□□□ -1.02
CAPN3-213ENST00000565173 YY2O15391 372 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 CCP110O43303 1012 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 RASA4O43374 803 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 BUB1BO60566 1050 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-213ENST00000565173 TM7SF2O76062 418 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 CELA2BP08218 269 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-213ENST00000565173 TSHRP16473 764 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 EPHB2P29323 1055 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 EIF4A3P38919 411 aaKnown RBP8.68□□□□□ -1.02
CAPN3-213ENST00000565173 NSFP46459 744 aaKnown RBP8.68□□□□□ -1.02
CAPN3-213ENST00000565173 ZNF143P52747 638 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-213ENST00000565173 COPB1P53618 953 aaKnown RBP8.68□□□□□ -1.02
CAPN3-213ENST00000565173 ADKP55263 362 aaKnown RBP8.68□□□□□ -1.02
CAPN3-213ENST00000565173 PCBP4P57723 403 aaKnown RBP8.68□□□□□ -1.02
CAPN3-213ENST00000565173 YBEYP58557 167 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-213ENST00000565173 SKOR1P84550 965 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 OGDHQ02218 1023 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 SERINC3Q13530 473 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 C1orf61Q13536 156 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 PTK2BQ14289 1009 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 NR0B2Q15466 257 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 KLHL40Q2TBA0 621 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 TMEM52BQ4KMG9 183 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 MACC1Q6ZN28 852 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 NYAP1Q6ZVC0 841 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 GPR155Q7Z3F1 870 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 SLC35F3Q8IY50 421 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 PHACTR4Q8IZ21 702 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 LSMEM2Q8N112 164 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 UMODL1-AS1Q8N2C9 162 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 BTN2A2Q8WVV5 523 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 GRAMD1AQ96CP6 724 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 ATXN7L3BQ96GX2 97 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 GDAP1L1Q96MZ0 367 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 SLC46A1Q96NT5 459 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 IL12RB2Q99665 862 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 EPAS1Q99814 870 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 WRAP53Q9BUR4 548 aaKnown RBP8.68□□□□□ -1.02
CAPN3-213ENST00000565173 LRRC61Q9BV99 259 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 SELENOOQ9BVL4 669 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 HSD3B7Q9H2F3 369 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 SPASTQ9UBP0 616 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 LHX3Q9UBR4 397 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 APOBEC3BQ9UH17 382 aaKnown RBP8.68□□□□□ -1.02
CAPN3-213ENST00000565173 SATB2Q9UPW6 733 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 ENTPD2Q9Y5L3 495 aa8.68□□□□□ -1.02
CAPN3-213ENST00000565173 BSNQ9UPA5 3926 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 TSPAN11A1L157 253 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 PMS2P1A4D2B8 440 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 LGALS16A8MUM7 142 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 CDRT15L2A8MXV6 281 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 J3KR12 359 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 TOR1BO14657 336 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 MUSKO15146 869 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms