RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 COL4A2P08572 1712 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 SDK1Q7Z5N4 2213 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 AKAP13Q12802 2813 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 TTC24A2A3L6 582 aaPredicted RBP11.22□□□□□ -0.61
SF3B3-205ENST00000564899 ERI2A8K979 691 aaKnown RBP11.22□□□□□ -0.61
SF3B3-205ENST00000564899 K7ERQ8 282 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 SMAD6O43541 496 aaKnown RBP11.22□□□□□ -0.61
SF3B3-205ENST00000564899 AP2A1O95782 977 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 MT-CYBP00156 380 aaPredicted RBP11.22□□□□□ -0.61
SF3B3-205ENST00000564899 ATP5BP06576 529 aaKnown RBP11.22□□□□□ -0.61
SF3B3-205ENST00000564899 FAM153BP0C7A2 387 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 HOXB3P14651 431 aaPredicted RBP11.22□□□□□ -0.61
SF3B3-205ENST00000564899 CD86P42081 329 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 RGRP47804 291 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 SOX9P48436 509 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 ARL4CP56559 192 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 SARNPP82979 210 aaKnown RBP11.22□□□□□ -0.61
SF3B3-205ENST00000564899 SKOR1P84550 965 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 CDK16Q00536 496 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 MESP2Q0VG99 397 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 MTAPQ13126 283 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 SPARCL1Q14515 664 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 EIF4HQ15056 248 aaKnown RBP11.22□□□□□ -0.61
SF3B3-205ENST00000564899 FAM153CQ494X1 144 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 PPM1JQ5JR12 505 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 ALG1LQ6GMV1 187 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 C22orf39Q6P5X5 142 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 FBXO38Q6PIJ6 1188 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 TPRG1Q6ZUI0 275 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 PRPF39Q86UA1 669 aaKnown RBP11.22□□□□□ -0.61
SF3B3-205ENST00000564899 CCDC25Q86WR0 208 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 KLHDC8BQ8IXV7 354 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 ZNF687Q8N1G0 1237 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 PHTF2Q8N3S3 785 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 SH2D3CQ8N5H7 860 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 TERB1Q8NA31 727 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 MCUQ8NE86 351 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 IPMKQ8NFU5 416 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 ARRDC2Q8TBH0 407 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 CHD5Q8TDI0 1954 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 CYB5D2Q8WUJ1 264 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 SORCS1Q8WY21 1168 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 ANKRD7Q92527 254 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 CHFRQ96EP1 664 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 PWWP2AQ96N64 755 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 NUDCD1Q96RS6 583 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 FRMD8Q9BZ67 464 aaPredicted RBP11.22□□□□□ -0.61
SF3B3-205ENST00000564899 FOXP3Q9BZS1 431 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 TM6SF2Q9BZW4 377 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 SCUBE2Q9NQ36 999 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 TRPV5Q9NQA5 729 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 HEBP1Q9NRV9 189 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 UBP1Q9NZI7 540 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 ERVW-1Q9UQF0 538 aa11.22□□□□□ -0.61
SF3B3-205ENST00000564899 TBC1D3BA6NDS4 549 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 PRRT4C9JH25 899 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 SPECC1L-ADORA2AF8WAN1 911 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 INSIG1O15503 277 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 PMPCBO75439 489 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 GJB3O75712 270 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 SUN1O94901 812 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 KAT7O95251 611 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 IGSF6O95976 241 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 APODP05090 189 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 SRPRAP08240 638 aaKnown RBP11.21□□□□□ -0.61
SF3B3-205ENST00000564899 MMP2P08253 660 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 DLDP09622 509 aaKnown RBP11.21□□□□□ -0.61
SF3B3-205ENST00000564899 CR2P20023 1033 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 CES1P23141 567 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 NNMTP40261 264 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 GRIA2P42262 883 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 TNNT3P45378 269 aaPredicted RBP11.21□□□□□ -0.61
SF3B3-205ENST00000564899 SCNN1BP51168 640 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 WNT3AP56704 352 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 ST8SIA6P61647 398 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 NSUN2Q08J23 767 aaKnown RBP eCLIP11.21□□□□□ -0.61
SF3B3-205ENST00000564899 DMWDQ09019 674 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 SRSF5Q13243 272 aaKnown RBP11.21□□□□□ -0.61
SF3B3-205ENST00000564899 MPP3Q13368 585 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 DLG2Q15700 870 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 SLC14A2Q15849 920 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 HIF1AQ16665 826 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 ATXN7L2Q5T6C5 722 aaPredicted RBP11.21□□□□□ -0.61
SF3B3-205ENST00000564899 KCTD11Q693B1 232 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 NAPEPLDQ6IQ20 393 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 KDELC1Q6UW63 502 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 CEP128Q6ZU80 1094 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 CENPUQ71F23 418 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 ZNF534Q76KX8 674 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 PDIK1LQ8N165 341 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 PCDH20Q8N6Y1 951 aaKnown RBP11.21□□□□□ -0.61
SF3B3-205ENST00000564899 HNRNPLLQ8WVV9 542 aaKnown RBP11.21□□□□□ -0.61
SF3B3-205ENST00000564899 DNASE1L2Q92874 299 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 CAVIN3Q969G5 261 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 CLDN23Q96B33 292 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 MRGPRX3Q96LB0 322 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 GDAP1L1Q96MZ0 367 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 SERPINB12Q96P63 405 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 P2RY13Q9BPV8 354 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 TBL1YQ9BQ87 522 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms