RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 EXOC2Q96KP1 924 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 ZSWIM3Q96MP5 696 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 ZNF317Q96PQ6 595 aaPredicted RBP19.75■□□□□ 0.75
CLN6-205ENST00000564846 CCT8L2Q96SF2 557 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 AGAP2Q99490 1192 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 RBBP8Q99708 897 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 SFXN1Q9H9B4 322 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 IARS2Q9NSE4 1012 aaKnown RBP19.75■□□□□ 0.75
CLN6-205ENST00000564846 MKS1Q9NXB0 559 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 LHX3Q9UBR4 397 aa19.75■□□□□ 0.75
CLN6-205ENST00000564846 CCDC78A2IDD5 438 aa19.74■□□□□ 0.75
CLN6-205ENST00000564846 PENKP01210 267 aaPredicted RBP19.74■□□□□ 0.75
CLN6-205ENST00000564846 WEE1P30291 646 aa19.74■□□□□ 0.75
CLN6-205ENST00000564846 ARCN1P48444 511 aaKnown RBP19.74■□□□□ 0.75
CLN6-205ENST00000564846 RHOAP61586 193 aa19.74■□□□□ 0.75
CLN6-205ENST00000564846 SLC20A2Q08357 652 aa19.74■□□□□ 0.75
CLN6-205ENST00000564846 CNGA3Q16281 694 aa19.74■□□□□ 0.75
CLN6-205ENST00000564846 TSTD2Q5T7W7 516 aa19.74■□□□□ 0.75
CLN6-205ENST00000564846 ARID3BQ8IVW6 561 aaPredicted RBP19.74■□□□□ 0.75
CLN6-205ENST00000564846 CNTN4Q8IWV2 1026 aa19.74■□□□□ 0.75
CLN6-205ENST00000564846 ACMSDQ8TDX5 336 aa19.74■□□□□ 0.75
CLN6-205ENST00000564846 GDPD5Q8WTR4 605 aa19.74■□□□□ 0.75
CLN6-205ENST00000564846 PEX13Q92968 403 aa19.74■□□□□ 0.75
CLN6-205ENST00000564846 MAGEB18Q96M61 343 aa19.74■□□□□ 0.75
CLN6-205ENST00000564846 TDRD1Q9BXT4 1180 aaKnown RBP19.74■□□□□ 0.75
CLN6-205ENST00000564846 SLC28A3Q9HAS3 691 aa19.74■□□□□ 0.75
CLN6-205ENST00000564846 CLEC4EQ9ULY5 219 aa19.74■□□□□ 0.75
CLN6-205ENST00000564846 CHD7Q9P2D1 2997 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 MYO7AQ13402 2215 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 NOTCH4Q99466 2003 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 MROH6A6NGR9 719 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 COPEO14579 308 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 SLC9A3R1O14745 358 aaPredicted RBP19.73■□□□□ 0.75
CLN6-205ENST00000564846 VAPBO95292 243 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 NEK3P51956 506 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 LIMK2P53671 638 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 SMAD1Q15797 465 aaKnown RBP19.73■□□□□ 0.75
CLN6-205ENST00000564846 PLEKHG6Q3KR16 790 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 TMEM25Q86YD3 366 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 KIAA1958Q8N8K9 716 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 GABPB2Q8TAK5 448 aaPredicted RBP19.73■□□□□ 0.75
CLN6-205ENST00000564846 GDAP1Q8TB36 358 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 ING5Q8WYH8 240 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 IRF7Q92985 503 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 LMLNQ96KR4 655 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 GDF15Q99988 308 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 RABEP2Q9H5N1 569 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 ABCB8Q9NUT2 735 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 SLC2A6Q9UGQ3 507 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 CHD9Q3L8U1 2897 aa19.73■□□□□ 0.75
CLN6-205ENST00000564846 TIMM44O43615 452 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 SIN3BO75182 1162 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 ARNTP27540 789 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 CD70P32970 193 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 PDE1BQ01064 536 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 KCNC3Q14003 757 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 UGP2Q16851 508 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 HHATQ5VTY9 493 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 NCEH1Q6PIU2 408 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 TMC5Q6UXY8 1006 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 CELF5Q8N6W0 485 aaKnown RBP19.72■□□□□ 0.75
CLN6-205ENST00000564846 C12orf76Q8N812 135 aaPredicted RBP19.72■□□□□ 0.75
CLN6-205ENST00000564846 ITFG1Q8TB96 612 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 BRSK1Q8TDC3 778 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 PPP2R3CQ969Q6 453 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 PAIP2Q9BPZ3 127 aaKnown RBP19.72■□□□□ 0.75
CLN6-205ENST00000564846 FAM167BQ9BTA0 163 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 BBS2Q9BXC9 721 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 DZANK1Q9NVP4 752 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 FCF1Q9Y324 198 aaKnown RBP19.72■□□□□ 0.75
CLN6-205ENST00000564846 DOCK6Q96HP0 2047 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 CCDC85CA6NKD9 419 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 CCT5P48643 541 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 THOC5Q13769 683 aaKnown RBP19.72■□□□□ 0.75
CLN6-205ENST00000564846 GALNT3Q14435 633 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 CBX2Q14781 532 aaPredicted RBP19.72■□□□□ 0.75
CLN6-205ENST00000564846 LVRNQ6Q4G3 990 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 RNF135Q8IUD6 432 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 NSMCE3Q96MG7 304 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 MCMBPQ9BTE3 642 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 IQCGQ9H095 443 aaKnown RBP19.72■□□□□ 0.75
CLN6-205ENST00000564846 SPHK2Q9NRA0 654 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 RIMKLBQ9ULI2 386 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 CHKBQ9Y259 395 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 RAI2Q9Y5P3 530 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 MIA3Q5JRA6 1907 aa19.72■□□□□ 0.75
CLN6-205ENST00000564846 NEDD8-MDP1E9PL57 170 aa19.71■□□□□ 0.75
CLN6-205ENST00000564846 GOLGA8TH3BQL2 631 aa19.71■□□□□ 0.75
CLN6-205ENST00000564846 MT-CO1P00395 513 aa19.71■□□□□ 0.75
CLN6-205ENST00000564846 ALDOAP04075 364 aaKnown RBP19.71■□□□□ 0.75
CLN6-205ENST00000564846 AP1S1P61966 158 aa19.71■□□□□ 0.75
CLN6-205ENST00000564846 ZSCAN26Q16670 478 aa19.71■□□□□ 0.75
CLN6-205ENST00000564846 CPLX4Q7Z7G2 160 aa19.71■□□□□ 0.75
CLN6-205ENST00000564846 BLOC1S5Q8TDH9 187 aa19.71■□□□□ 0.75
CLN6-205ENST00000564846 ZNF473Q8WTR7 871 aaKnown RBP19.71■□□□□ 0.75
CLN6-205ENST00000564846 PTPRN2Q92932 1015 aa19.71■□□□□ 0.75
CLN6-205ENST00000564846 ISL2Q96A47 359 aa19.71■□□□□ 0.75
CLN6-205ENST00000564846 SRPK1Q96SB4 655 aaKnown RBP19.71■□□□□ 0.75
CLN6-205ENST00000564846 ADGRE3Q9BY15 652 aa19.71■□□□□ 0.75
CLN6-205ENST00000564846 LINC00597Q9H2U6 94 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms