RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 MAMDC4Q6UXC1 1216 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 UTS2BQ765I0 119 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 IRGQQ8WZA9 623 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 PBXIP1Q96AQ6 731 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 MAML3Q96JK9 1138 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 PIGVQ9NUD9 493 aa20.68■□□□□ 0.9
MAP1LC3B-206ENST00000564844 COL11A1P12107 1806 aaPredicted RBP20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 AP2A1O95782 977 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 GMPSP49915 693 aaPredicted RBP20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ZNF789Q5FWF6 425 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 CENPSQ8N2Z9 138 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SHCBP1Q8NEM2 672 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 BPIFB6Q8NFQ5 453 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 STYXQ8WUJ0 223 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 TFAP2CQ92754 450 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 GPR20Q99678 358 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 RPF2Q9H7B2 306 aaKnown RBP20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 IGSF9Q9P2J2 1179 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ADAM28Q9UKQ2 775 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 A0A087WXM4 84 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 FAM95CA0A1B0GW59 222 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 PPP6CO00743 305 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 CLOCKO15516 846 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 AKAP5P24588 427 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SLC7A1P30825 629 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 STX5Q13190 355 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 DPYSQ14117 519 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 CYP2A13Q16696 494 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 NCCRP1Q6ZVX7 275 aaPredicted RBP20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 EPHX4Q8IUS5 362 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 DDHD1Q8NEL9 900 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SEPHS2Q99611 448 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 EFHD1Q9BUP0 239 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 UPF3AQ9H1J1 476 aaKnown RBP20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 CACNG4Q9UBN1 327 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 VPS28Q9UK41 221 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 DGKBQ9Y6T7 804 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 FUOMA2VDF0 154 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SRP72O76094 671 aaKnown RBP20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 CD97P48960 835 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SLC12A1Q13621 1099 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 RBM20Q5T481 1227 aaKnown RBP20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 KCTD8Q6ZWB6 473 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SGCDQ92629 289 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 COX4I2Q96KJ9 171 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 CDHR5Q9HBB8 845 aa20.67■□□□□ 0.9
MAP1LC3B-206ENST00000564844 COL4A5P29400 1685 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 I6L893 689 aaPredicted RBP20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 EI24O14681 340 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SNRPB2P08579 225 aaKnown RBP20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ATICP31939 592 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 APLP1P51693 650 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 BMXP51813 675 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 FAM83EQ2M2I3 478 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ZBED5Q49AG3 693 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 FKBP1CQ5VVH2 108 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 PARP8Q8N3A8 854 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 FAM49AQ9H0Q0 323 aaPredicted RBP20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SETD4Q9NVD3 440 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 NCKIPSDQ9NZQ3 722 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ADAM23O75077 832 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 INSRRP14616 1297 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 STMN1P16949 149 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 HMOX2P30519 316 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 PTPN9P43378 593 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 TNFAIP1Q13829 316 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 RETREG3Q86VR2 466 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 TMEM126BQ8IUX1 230 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 NPLQ9BXD5 320 aaPredicted RBP20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 PADI4Q9UM07 663 aa20.66■□□□□ 0.9
MAP1LC3B-206ENST00000564844 DLGAP1O14490 977 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 INPP4BO15327 924 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 NRP2O60462 931 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 MAP4P27816 1152 aaKnown RBP20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 TKTP29401 623 aaKnown RBP20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SLC12A2P55011 1212 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 NAB1Q13506 487 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 PERM1Q5SV97 790 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 EGFLAMQ63HQ2 1017 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 CATSPERGQ6ZRH7 1159 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SLC26A9Q7LBE3 791 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ANKRD60Q9BZ19 345 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SUCOQ9UBS9 1254 aaKnown RBP20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 VTI1BQ9UEU0 232 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 EVLQ9UI08 416 aaPredicted RBP20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 USP22Q9UPT9 525 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 HACD1B0YJ81 288 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 PMPCBO75439 489 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SUPT7LO94864 414 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 C8BP07358 591 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ZNF286BP0CG31 522 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 IGFBP6P24592 240 aaPredicted RBP20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ICAM3P32942 547 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 PIGFQ07326 219 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 MERTKQ12866 999 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 NR1D2Q14995 579 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 GALNT18Q6P9A2 607 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 ARHGAP36Q6ZRI8 547 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 SLC15A4Q8N697 577 aa20.65■□□□□ 0.9
MAP1LC3B-206ENST00000564844 DNAJB14Q8TBM8 379 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms