RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 FZD3Q9NPG1 666 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 ETNK2Q9NVF9 386 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 DKK3Q9UBP4 350 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 PCOLCE2Q9UKZ9 415 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 CA5BQ9Y2D0 317 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 CNOT1A5YKK6 2376 aaKnown RBP18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 SHROOM3Q8TF72 1996 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 YKT6O15498 198 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 PIGNO95427 931 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 MAN1A1P33908 653 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 ARHGAP25P42331 645 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 CSNK1DP48730 415 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 RENBPP51606 427 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 FAM193AP78312 1265 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 NSUN2Q08J23 767 aaKnown RBP eCLIP18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 FOXC1Q12948 553 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 MMRN1Q13201 1228 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 LBRQ14739 615 aaKnown RBP18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 PDK2Q15119 407 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 INAVAQ3KP66 663 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 TC2NQ8N9U0 490 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 TMEM145Q8NBT3 493 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 FAM71BQ8TC56 605 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 NSMCE1Q8WV22 266 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 TSC1Q92574 1164 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 VOPP1Q96AW1 172 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 ZNF641Q96N77 438 aaPredicted RBP18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 ZNF599Q96NL3 588 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 TUBGCP5Q96RT8 1024 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 ANP32EQ9BTT0 268 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 SEPT3Q9UH03 358 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 ANGPTL2Q9UKU9 493 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 ITM2BQ9Y287 266 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 ANKRD36A6QL64 1941 aa18.56■□□□□ 0.56
SYNGR3-204ENST00000564642 SPTBN2O15020 2390 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 IGLON5A6NGN9 336 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 CBFA2T3O75081 653 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 ITGAVP06756 1048 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 CD48P09326 243 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 THEGLP0DJG4 465 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 TIMP2P16035 220 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 IL4RP24394 825 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 GRK6P43250 576 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 TAS2R40P59535 323 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 LRRC73Q5JTD7 316 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 TMCO4Q5TGY1 634 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 SPATS2Q86XZ4 545 aaKnown RBP18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 CPNE8Q86YQ8 564 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 BBS5Q8N3I7 341 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 ATPAF2Q8N5M1 289 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 PAF1Q8N7H5 531 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 FAM174AQ8TBP5 190 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 CXorf40AQ8TE69 158 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 CDC6Q99741 560 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 ATP13A3Q9H7F0 1226 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 GGT7Q9UJ14 662 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 INTUQ9ULD6 942 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 HS3ST3A1Q9Y663 406 aa18.55■□□□□ 0.56
SYNGR3-204ENST00000564642 KNL1Q8NG31 2342 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 AREL1O15033 823 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 BUB1BO60566 1050 aaPredicted RBP18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 SERPINA4P29622 427 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 RGRP47804 291 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 SCNN1BP51168 640 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 SUOXP51687 545 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 ARSEP51690 589 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 ZNF75DP51815 510 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 CLDN2P57739 230 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 BCL2L1Q07817 233 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 SLC10A7Q0GE19 358 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 ELP6Q0PNE2 266 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 DPYSL3Q14195 570 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 FGL2Q14314 439 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 ZNF235Q14590 738 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 ANKRD20A8PQ5CZ79 823 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 CAMK1DQ8IU85 385 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 LRRC49Q8IUZ0 686 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 RFFLQ8WZ73 363 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 MRFAP1L1Q96HT8 127 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 C1QTNF2Q9BXJ5 285 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 KLHL11Q9NVR0 708 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 BTBD3Q9Y2F9 522 aa18.54■□□□□ 0.56
SYNGR3-204ENST00000564642 A6NNZ2 444 aa18.53■□□□□ 0.56
SYNGR3-204ENST00000564642 FPGTO14772 594 aa18.53■□□□□ 0.56
SYNGR3-204ENST00000564642 MAFKO60675 156 aa18.53■□□□□ 0.56
SYNGR3-204ENST00000564642 RXRGP48443 463 aa18.53■□□□□ 0.56
SYNGR3-204ENST00000564642 SHC2P98077 582 aa18.53■□□□□ 0.56
SYNGR3-204ENST00000564642 UGP2Q16851 508 aa18.53■□□□□ 0.56
SYNGR3-204ENST00000564642 BRAT1Q6PJG6 821 aa18.53■□□□□ 0.56
SYNGR3-204ENST00000564642 GCNT7Q6ZNI0 430 aa18.53■□□□□ 0.56
SYNGR3-204ENST00000564642 GLRX5Q86SX6 157 aa18.53■□□□□ 0.56
SYNGR3-204ENST00000564642 GATAD2AQ86YP4 633 aa18.53■□□□□ 0.56
SYNGR3-204ENST00000564642 DCP2Q8IU60 420 aaKnown RBP18.53■□□□□ 0.56
SYNGR3-204ENST00000564642 ASB12Q8WXK4 309 aa18.53■□□□□ 0.56
SYNGR3-204ENST00000564642 LENG8Q96PV6 779 aaPredicted RBP18.53■□□□□ 0.56
SYNGR3-204ENST00000564642 PSKH2Q96QS6 385 aa18.53■□□□□ 0.56
SYNGR3-204ENST00000564642 ZNF670Q9BS34 389 aa18.53■□□□□ 0.56
SYNGR3-204ENST00000564642 USP24Q9UPU5 2620 aa18.53■□□□□ 0.56
SYNGR3-204ENST00000564642 APOBEC2Q9Y235 224 aaKnown RBP18.53■□□□□ 0.56
SYNGR3-204ENST00000564642 CABIN1Q9Y6J0 2220 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms