RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 C17orf113A0A1B0GUU1 675 aa4.98□□□□□ -1.61
UBR1-205ENST00000564540 PABPN1LA6NDY0 278 aaKnown RBP4.98□□□□□ -1.61
UBR1-205ENST00000564540 CBY3A6NI87 242 aa4.98□□□□□ -1.61
UBR1-205ENST00000564540 EBAG9O00559 213 aa4.98□□□□□ -1.61
UBR1-205ENST00000564540 CH25HO95992 272 aa4.98□□□□□ -1.61
UBR1-205ENST00000564540 MYF6P23409 242 aa4.98□□□□□ -1.61
UBR1-205ENST00000564540 DDR1Q08345 913 aa4.98□□□□□ -1.61
UBR1-205ENST00000564540 TBL3Q12788 808 aaKnown RBP4.98□□□□□ -1.61
UBR1-205ENST00000564540 EFR3AQ14156 821 aa4.98□□□□□ -1.61
UBR1-205ENST00000564540 EDRF1Q3B7T1 1238 aa4.98□□□□□ -1.61
UBR1-205ENST00000564540 CES5AQ6NT32 575 aa4.98□□□□□ -1.61
UBR1-205ENST00000564540 TCP11L2Q8N4U5 519 aa4.98□□□□□ -1.61
UBR1-205ENST00000564540 AADATQ8N5Z0 425 aa4.98□□□□□ -1.61
UBR1-205ENST00000564540 LSM14AQ8ND56 463 aaKnown RBP4.98□□□□□ -1.61
UBR1-205ENST00000564540 TRIB2Q92519 343 aa4.98□□□□□ -1.61
UBR1-205ENST00000564540 CD180Q99467 661 aa4.98□□□□□ -1.61
UBR1-205ENST00000564540 PHF7Q9BWX1 381 aaPredicted RBP4.98□□□□□ -1.61
UBR1-205ENST00000564540 TAOK3Q9H2K8 898 aa4.98□□□□□ -1.61
UBR1-205ENST00000564540 ANKRD10Q9NXR5 420 aa4.98□□□□□ -1.61
UBR1-205ENST00000564540 OR6C3Q9NZP0 311 aa4.98□□□□□ -1.61
UBR1-205ENST00000564540 NDRG3Q9UGV2 375 aa4.98□□□□□ -1.61
UBR1-205ENST00000564540 PCDHGB5Q9Y5G0 923 aa4.98□□□□□ -1.61
UBR1-205ENST00000564540 SCN5AQ14524 2016 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 A0A1B0GUV1 79 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.97□□□□□ -1.61
UBR1-205ENST00000564540 PLSCR5A0PG75 271 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 TYW5A2RUC4 315 aaKnown RBP4.97□□□□□ -1.61
UBR1-205ENST00000564540 VNN2O95498 520 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 SRD5A1P18405 259 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 RYKP34925 604 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 PIGAP37287 484 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 ERVFC1-1P60608 527 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 ST3GAL1Q11201 340 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 MYBPHQ13203 477 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 SLC39A14Q15043 492 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 EFHC1Q5JVL4 640 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 MAP3K21Q5TCX8 1036 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 SPSB3Q6PJ21 355 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 PGBD5Q8N414 524 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 LILRB1Q8NHL6 650 aaPredicted RBP4.97□□□□□ -1.61
UBR1-205ENST00000564540 RUFY2Q8WXA3 655 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 ZSCAN31Q96LW9 406 aaPredicted RBP4.97□□□□□ -1.61
UBR1-205ENST00000564540 SLITRK1Q96PX8 696 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 EYA3Q99504 573 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 HERPUD2Q9BSE4 406 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 ZNF556Q9HAH1 456 aa4.97□□□□□ -1.61
UBR1-205ENST00000564540 ARHGAP10A1A4S6 786 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 IFRD1O00458 451 aaPredicted RBP4.96□□□□□ -1.62
UBR1-205ENST00000564540 TSPAN3O60637 253 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 RGS11O94810 467 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 AFPP02771 609 aaKnown RBP4.96□□□□□ -1.62
UBR1-205ENST00000564540 EDN2P20800 178 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 SSTR2P30874 369 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 BLKP51451 505 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 PPFIA1Q13136 1202 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 TDGQ13569 410 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 DHX34Q14147 1143 aaKnown RBP4.96□□□□□ -1.62
UBR1-205ENST00000564540 SF3B4Q15427 424 aaKnown RBP eCLIP4.96□□□□□ -1.628e-6■□□□□ 8.7
UBR1-205ENST00000564540 DCAF6Q58WW2 860 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 ZNF667Q5HYK9 610 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 WDR45BQ5MNZ6 344 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 CCDC129Q6ZRS4 1044 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 ADGRG6Q86SQ4 1221 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 CPOQ8IVL8 374 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 ANKRD42Q8N9B4 389 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 RFWD2Q8NHY2 731 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 TRIM63Q969Q1 353 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 TTYH1Q9H313 450 aaPredicted RBP4.96□□□□□ -1.62
UBR1-205ENST00000564540 GAREM1Q9H706 876 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 DDX31Q9H8H2 851 aaKnown RBP4.96□□□□□ -1.62
UBR1-205ENST00000564540 RIC8AQ9NPQ8 531 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 ZNF112Q9UJU3 913 aa4.96□□□□□ -1.62
UBR1-205ENST00000564540 A0A0U1RQJ8 604 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 HSPB2A8KAH6 182 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 KLRF2D3W0D1 207 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 FMO4P31512 558 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 CCR5P51681 352 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 HDAC4P56524 1084 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 RUNX2Q13950 521 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 HSPB2Q16082 182 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 KIF19Q2TAC6 998 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 SETMARQ53H47 684 aaPredicted RBP4.95□□□□□ -1.62
UBR1-205ENST00000564540 ESCO2Q56NI9 601 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 XKR9Q5GH70 373 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 FAM76BQ5HYJ3 339 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 ATG16L1Q676U5 607 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 RHBDF2Q6PJF5 856 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 Q6ZTC4 211 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.95□□□□□ -1.62
UBR1-205ENST00000564540 SFTPA2Q8IWL1 248 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 PARP16Q8N5Y8 322 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 ZNF114Q8NC26 417 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 ELP4Q96EB1 424 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 ADGRG7Q96K78 797 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 RETREG1Q9H6L5 497 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 CYSLTR2Q9NS75 346 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 PEMTQ9UBM1 199 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 MALT1Q9UDY8 824 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 HSF4Q9ULV5 492 aa4.95□□□□□ -1.62
UBR1-205ENST00000564540 PAM16Q9Y3D7 125 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms