RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 OR12D3Q9UGF7 316 aa12.71□□□□□ -0.38
COMMD4-209ENST00000564068 PCDHGB4Q9UN71 923 aa12.71□□□□□ -0.38
COMMD4-209ENST00000564068 ZNF541Q9H0D2 1346 aa12.71□□□□□ -0.38
COMMD4-209ENST00000564068 PLIN4Q96Q06 1357 aa12.71□□□□□ -0.38
COMMD4-209ENST00000564068 ASB14A6NK59 587 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 C2CD4BA6NLJ0 364 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 E7ENX8 843 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 TNPO2O14787 897 aaKnown RBP12.7□□□□□ -0.38
COMMD4-209ENST00000564068 PLA2G6O60733 806 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 ATG7O95352 703 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 MYL3P08590 195 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 ZNF12P17014 697 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 ZNF846Q147U1 533 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 SNX17Q15036 470 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 C6orf183Q5T699 404 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 MBLAC2Q68D91 279 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 NOTUMQ6P988 496 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 KLHL35Q6PF15 583 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 PAGE2Q7Z2X7 111 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 ULBP1Q9BZM6 244 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 TKTL2Q9H0I9 626 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 ZNF556Q9HAH1 456 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 EIF3LQ9Y262 564 aaKnown RBP12.7□□□□□ -0.38
COMMD4-209ENST00000564068 TPRKBQ9Y3C4 175 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 FAM32AQ9Y421 112 aaKnown RBP12.7□□□□□ -0.38
COMMD4-209ENST00000564068 MYH3P11055 1940 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 LRRC37A3O60309 1634 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 A0A0J9YVX5 310 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 TSC22D2O75157 780 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 MLNP12872 115 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 NCK1P16333 377 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 CCR10P46092 362 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 MRPL28Q13084 256 aaKnown RBP12.7□□□□□ -0.38
COMMD4-209ENST00000564068 SPANXN2Q5MJ10 180 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 TMEM214Q6NUQ4 689 aaKnown RBP12.7□□□□□ -0.38
COMMD4-209ENST00000564068 CHST15Q7LFX5 561 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-209ENST00000564068 MILR1Q7Z6M3 343 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 UTP15Q8TED0 518 aaKnown RBP12.7□□□□□ -0.38
COMMD4-209ENST00000564068 SEPT8Q92599 483 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 WNT8BQ93098 351 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 FBXL18Q96ME1 805 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 EPB41L1Q9H4G0 881 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 TMEM161AQ9NX61 479 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 SMPD3Q9NY59 655 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-209ENST00000564068 KDM3BQ7LBC6 1761 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 DYNC1LI2O43237 492 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-209ENST00000564068 KCNH1O95259 989 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 PENKP01210 267 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-209ENST00000564068 RPS9P46781 194 aaKnown RBP12.7□□□□□ -0.38
COMMD4-209ENST00000564068 TWF1Q12792 350 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 RALGPS2Q86X27 583 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-209ENST00000564068 MIB1Q86YT6 1006 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 ANKRD52Q8NB46 1076 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 PHC3Q8NDX5 983 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 DEPDC7Q96QD5 511 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 COQ7Q99807 217 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 KCNK13Q9HB14 408 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 PCDH12Q9NPG4 1184 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 USE1Q9NZ43 259 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 GPC6Q9Y625 555 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-209ENST00000564068 EI24O14681 340 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 ZBTB24O43167 697 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-209ENST00000564068 GCATO75600 419 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 USP17L7P0C7H9 530 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 FGFR1P11362 822 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 TPTEP56180 551 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 MPP1Q00013 466 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 OLIG2Q13516 323 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 DDX39BQ13838 428 aaKnown RBP12.7□□□□□ -0.38
COMMD4-209ENST00000564068 TNFAIP8L3Q5GJ75 292 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 REP15Q6BDI9 236 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 KIAA0319LQ8IZA0 1049 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 SIX5Q8N196 739 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 C1orf127Q8N9H9 656 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 SMYD1Q8NB12 490 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 RDH11Q8TC12 318 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 UGT2B28Q9BY64 529 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 DTLQ9NZJ0 730 aa12.7□□□□□ -0.38
COMMD4-209ENST00000564068 FAM159BA6NKW6 160 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 ATP6V1E1P36543 226 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 SLC25A11Q02978 314 aaKnown RBP12.69□□□□□ -0.38
COMMD4-209ENST00000564068 SEMA5AQ13591 1074 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 ZNF567Q8N184 647 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 MTERF3Q96E29 417 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 ZHX1-C8orf76Q96EF9 292 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 OSMRQ99650 979 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 ADARB2Q9NS39 739 aaKnown RBP12.69□□□□□ -0.38
COMMD4-209ENST00000564068 HMGXB4Q9UGU5 601 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 PHF24Q9UPV7 400 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 SNPHO15079 494 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 CTSHP09668 335 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 ZNF37AP17032 561 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-209ENST00000564068 GCAP28676 217 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 NOS2P35228 1153 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 CDK9P50750 372 aaKnown RBP12.69□□□□□ -0.38
COMMD4-209ENST00000564068 SPATA2LQ8IUW3 424 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-209ENST00000564068 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.69□□□□□ -0.38
COMMD4-209ENST00000564068 PLEKHA8Q96JA3 519 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 SYTL2Q9HCH5 934 aa12.69□□□□□ -0.38
COMMD4-209ENST00000564068 CACNA2D2Q9NY47 1150 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms