RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 CCNYL3P0C7X3 344 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 PLS3P13797 630 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 IFNAR1P17181 557 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 BMP6P22004 513 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 PTPN4P29074 926 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 NNMTP40261 264 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 TDGF1P3P51864 188 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 RPS18P62269 152 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 TRIP4Q15650 581 aaPredicted RBP10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 DEFB113Q30KQ7 82 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 TSGA10IPQ3SY00 556 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 CRELD2Q6UXH1 353 aaPredicted RBP10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 TECPR1Q7Z6L1 1165 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 SCD5Q86SK9 330 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 WDR49Q8IV35 697 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 MFN1Q8IWA4 741 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 TMEM102Q8N9M5 508 aaPredicted RBP10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 FAM46DQ8NEK8 389 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 SMOQ99835 787 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 MRPL45Q9BRJ2 306 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 C1QTNF2Q9BXJ5 285 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 IRX2Q9BZI1 471 aaPredicted RBP10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 OLAHQ9NV23 265 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 CLIC5Q9NZA1 410 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 NAGPAQ9UK23 515 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 PADI1Q9ULC6 663 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 NAP1L2Q9ULW6 460 aaPredicted RBP10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 NOVA2Q9UNW9 492 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 BTRCQ9Y297 605 aa10.8□□□□□ -0.68
HDGFL3-204ENST00000563790 PP2D1A8MPX8 630 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 RHPN2P1A8MT19 583 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 B4DGG1 531 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 H0YCG3 227 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 TOR1BO14657 336 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 AP1G2O75843 785 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 BEST1O76090 585 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 RASGRP1O95267 797 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 PLEKP08567 350 aaPredicted RBP10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 RALAP11233 206 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 EIF4A3P38919 411 aaKnown RBP10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 ALG11Q2TAA5 492 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 NKAIN2Q5VXU1 208 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 SPECC1LQ69YQ0 1117 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 ZNF324BQ6AW86 544 aaPredicted RBP10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 MED25Q71SY5 747 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 ZSCAN30Q86W11 494 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 C17orf82Q86X59 251 aaPredicted RBP10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 ERMNQ8TAM6 284 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 CACTINQ8WUQ7 758 aaKnown RBP10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 ASB12Q8WXK4 309 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 TM9SF4Q92544 642 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 TSACCQ96A04 125 aaPredicted RBP10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 RMND5BQ96G75 393 aaPredicted RBP10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 RUSC1Q9BVN2 902 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 C19orf24Q9BVV8 132 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 ZDHHC6Q9H6R6 413 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 CSNK1G1Q9HCP0 422 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 KRT82Q9NSB4 513 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 MARCH2Q9P0N8 246 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 KIF3AQ9Y496 699 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 CEP83Q9Y592 693 aa10.79□□□□□ -0.68
HDGFL3-204ENST00000563790 IGHV1OR21-1A0A087WYE8 117 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 GOLGA6L3A6NEY3 463 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 H7C1Q1 480 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 LATS1O95835 1130 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 TRIM49P0CI25 452 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 TRIM49CP0CI26 452 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 PDIA3P30101 505 aaKnown RBP10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 WNT7BP56706 349 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 SGCGQ13326 291 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 PIK3R6Q5UE93 754 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 SHEQ5VZ18 495 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 FAM180AQ6UWF9 173 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 TMEM207Q6UWW9 146 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 ERN2Q76MJ5 926 aaKnown RBP10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 GPRIN1Q7Z2K8 1008 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 ATP11CQ8NB49 1132 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 EPS8L1Q8TE68 723 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 HPDLQ96IR7 371 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 RUFY1Q96T51 708 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 TIPINQ9BVW5 301 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 HDAC8Q9BY41 377 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 BRD8Q9H0E9 1235 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 LHX9Q9NQ69 397 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 SIDT1Q9NXL6 827 aaKnown RBP10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 STRIP2Q9ULQ0 834 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 KIAA1024Q9UPX6 916 aa10.78□□□□□ -0.68
HDGFL3-204ENST00000563790 DRGXA6NNA5 263 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 NEMFO60524 1076 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 KIAA0754O94854 1291 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 MOCS3O95396 460 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 FAM163BP0C2L3 166 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 ZNF18P17022 549 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 IGFALSP35858 605 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 SLC12A3P55017 1021 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 RRADP55042 308 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 NCKAP1LP55160 1127 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 MAZP56270 477 aaKnown RBP10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 BMP2KLQ5H9B9 411 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 ADALQ6DHV7 355 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms