RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 MAGEB16A2A368 324 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 TCEA3O75764 348 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 EPOP01588 193 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 FGF1P05230 155 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 GDI1P31150 447 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 SEPT6Q14141 434 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 TTMPQ5BVD1 217 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 TMEM215Q68D42 235 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 NCEH1Q6PIU2 408 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 SRLQ86TD4 932 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 OR6K2Q8NGY2 324 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 TRMT61BQ9BVS5 477 aaKnown RBP22.17■■□□□ 1.14
LINC01960-201ENST00000563759 GTSE1Q9NYZ3 720 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 DEC1Q9P2X7 70 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 SLC27A6Q9Y2P4 619 aa22.17■■□□□ 1.14
LINC01960-201ENST00000563759 RGS16O15492 202 aaPredicted RBP22.16■■□□□ 1.14
LINC01960-201ENST00000563759 CDH16O75309 829 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 CISD3P0C7P0 127 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 ATXN1LP0C7T5 689 aaKnown RBP22.16■■□□□ 1.14
LINC01960-201ENST00000563759 KCNA5P22460 613 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 MAPK8P45983 427 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 SKIV2LQ15477 1246 aaKnown RBP22.16■■□□□ 1.14
LINC01960-201ENST00000563759 SKIDA1Q1XH10 827 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 PCID2Q5JVF3 399 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 SPANXN3Q5MJ09 141 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 KCTD16Q68DU8 428 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 GRAMD4Q6IC98 578 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 CES3Q6UWW8 571 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 RYBPQ8N488 228 aaPredicted RBP22.16■■□□□ 1.14
LINC01960-201ENST00000563759 OR2AP1Q8NGE2 309 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 TTC8Q8TAM2 541 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 PDCD6IPQ8WUM4 868 aaKnown RBP22.16■■□□□ 1.14
LINC01960-201ENST00000563759 TTC17Q96AE7 1141 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 MRRFQ96E11 262 aaKnown RBP22.16■■□□□ 1.14
LINC01960-201ENST00000563759 NSMCE3Q96MG7 304 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 PPCSQ9HAB8 311 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 CHRAC1Q9NRG0 131 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 EPS15L1Q9UBC2 864 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 CHKBQ9Y259 395 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 ARIH1Q9Y4X5 557 aaPredicted RBP22.16■■□□□ 1.14
LINC01960-201ENST00000563759 PCDHGC4Q9Y5F7 938 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 RAI2Q9Y5P3 530 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 NUMBLQ9Y6R0 609 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 UNC80Q8N2C7 3258 aa22.16■■□□□ 1.14
LINC01960-201ENST00000563759 FAM237BA0A1B0GVD1 139 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 PIAS1O75925 651 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 USP1O94782 785 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 NDST3O95803 873 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 NNMTP40261 264 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 SNRPD1P62314 119 aaKnown RBP22.15■■□□□ 1.14
LINC01960-201ENST00000563759 KDSRQ06136 332 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 CCDC85BQ15834 202 aaPredicted RBP22.15■■□□□ 1.14
LINC01960-201ENST00000563759 GAB4Q2WGN9 574 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 KBTBD12Q3ZCT8 623 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 ISG20Q96AZ6 181 aaKnown RBP22.15■■□□□ 1.14
LINC01960-201ENST00000563759 ATP6V1G3Q96LB4 118 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 CEP44Q9C0F1 390 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 PPANQ9NQ55 473 aaKnown RBP22.15■■□□□ 1.14
LINC01960-201ENST00000563759 CTNNAL1Q9UBT7 734 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 ERVW-1Q9UQF0 538 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 BNIP3LO60238 219 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 ATP5BP06576 529 aaKnown RBP22.15■■□□□ 1.14
LINC01960-201ENST00000563759 SLC6A11P48066 632 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 DGKKQ5KSL6 1271 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 TRMT10BQ6PF06 316 aaKnown RBP22.15■■□□□ 1.14
LINC01960-201ENST00000563759 TMEM135Q86UB9 458 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 CTAGE3PQ8IX95 158 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.15■■□□□ 1.14
LINC01960-201ENST00000563759 CYB5D2Q8WUJ1 264 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 PTCD2Q8WV60 388 aaKnown RBP22.15■■□□□ 1.14
LINC01960-201ENST00000563759 SORCS1Q8WY21 1168 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 MYLIPQ8WY64 445 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 RMDN1Q96DB5 314 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 PGM2Q96G03 612 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 TRIB3Q96RU7 358 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 PAFAH2Q99487 392 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 RPP25Q9BUL9 199 aaKnown RBP22.15■■□□□ 1.14
LINC01960-201ENST00000563759 KIFC1Q9BW19 673 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 FETUBQ9UGM5 382 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 EVLQ9UI08 416 aaPredicted RBP22.15■■□□□ 1.14
LINC01960-201ENST00000563759 SLCO3A1Q9UIG8 710 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 TCAF1Q9Y4C2 921 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 IKBKGQ9Y6K9 419 aa22.15■■□□□ 1.14
LINC01960-201ENST00000563759 CCDC78A2IDD5 438 aa22.14■■□□□ 1.13
LINC01960-201ENST00000563759 ASLP04424 464 aa22.14■■□□□ 1.13
LINC01960-201ENST00000563759 TRAF2Q12933 501 aa22.14■■□□□ 1.13
LINC01960-201ENST00000563759 DLG2Q15700 870 aa22.14■■□□□ 1.13
LINC01960-201ENST00000563759 PRPF38BQ5VTL8 546 aaKnown RBP22.14■■□□□ 1.13
LINC01960-201ENST00000563759 RIBC1Q8N443 379 aaPredicted RBP22.14■■□□□ 1.13
LINC01960-201ENST00000563759 PCDH20Q8N6Y1 951 aaKnown RBP22.14■■□□□ 1.13
LINC01960-201ENST00000563759 PAF1Q8N7H5 531 aa22.14■■□□□ 1.13
LINC01960-201ENST00000563759 LPCAT1Q8NF37 534 aa22.14■■□□□ 1.13
LINC01960-201ENST00000563759 MFSD3Q96ES6 412 aa22.14■■□□□ 1.13
LINC01960-201ENST00000563759 ADGRE3Q9BY15 652 aa22.14■■□□□ 1.13
LINC01960-201ENST00000563759 STMN4Q9H169 189 aaPredicted RBP22.14■■□□□ 1.13
LINC01960-201ENST00000563759 UBE2ZQ9H832 354 aaPredicted RBP22.14■■□□□ 1.13
LINC01960-201ENST00000563759 TBK1Q9UHD2 729 aa22.14■■□□□ 1.13
LINC01960-201ENST00000563759 SLC24A2Q9UI40 661 aa22.14■■□□□ 1.13
LINC01960-201ENST00000563759 SLC8A2Q9UPR5 921 aa22.14■■□□□ 1.13
LINC01960-201ENST00000563759 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms