RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 PCCAP05165 728 aaPredicted RBP3.63□□□□□ -1.83
LINC01416-201ENST00000563553 HNRNPCP07910 306 aaKnown RBP eCLIP3.63□□□□□ -1.83
LINC01416-201ENST00000563553 FAM228BP0C875 321 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 T-ENOLP0DO92 83 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 BRAFP15056 766 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 S100A1P23297 94 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 EPHB2P29323 1055 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 IFNAR2P48551 515 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 HSPA13P48723 471 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 NEK2P51955 445 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 MTTPP55157 894 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 TIMM10P62072 90 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 ASIC1P78348 528 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 PPATQ06203 517 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 ZBTB17Q13105 803 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 PRPF4BQ13523 1007 aaKnown RBP3.63□□□□□ -1.83
LINC01416-201ENST00000563553 IL17AQ16552 155 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 NDUFA5Q16718 116 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 SPDYE7PQ495Y7 208 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 GJC2Q5T442 439 aaPredicted RBP3.63□□□□□ -1.83
LINC01416-201ENST00000563553 SYDE2Q5VT97 1194 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 ARMC3Q5W041 872 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 RWDD4Q6NW29 188 aaKnown RBP3.63□□□□□ -1.83
LINC01416-201ENST00000563553 SFR1Q86XK3 245 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 MAP7D3Q8IWC1 876 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 BLIDQ8IZY5 108 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 CBARPQ8N350 705 aaPredicted RBP3.63□□□□□ -1.83
LINC01416-201ENST00000563553 SCAIQ8N9R8 606 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 ATP11CQ8NB49 1132 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 CATSPER1Q8NEC5 780 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 NGDNQ8NEJ9 315 aaKnown RBP3.63□□□□□ -1.83
LINC01416-201ENST00000563553 GRK7Q8WTQ7 553 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 RAB24Q969Q5 203 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 PTCD3Q96EY7 689 aaKnown RBP3.63□□□□□ -1.83
LINC01416-201ENST00000563553 NSL1Q96IY1 281 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 FAM81BQ96LP2 452 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 HNRNPABQ99729 332 aaKnown RBP3.63□□□□□ -1.83
LINC01416-201ENST00000563553 AP1M1Q9BXS5 423 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 OSBPL8Q9BZF1 889 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 RAB34Q9BZG1 259 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 UNKQ9C0B0 810 aaKnown RBP3.63□□□□□ -1.83
LINC01416-201ENST00000563553 C1orf21Q9H246 121 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 NDE1Q9NXR1 346 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 EURLQ9NYK6 297 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 HERC5Q9UII4 1024 aaKnown RBP3.63□□□□□ -1.83
LINC01416-201ENST00000563553 TUBD1Q9UJT1 453 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 PHTF1Q9UMS5 762 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 G3BP2Q9UN86 482 aaKnown RBP3.63□□□□□ -1.83
LINC01416-201ENST00000563553 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.63□□□□□ -1.83
LINC01416-201ENST00000563553 CCDC88AQ3V6T2 1871 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 UBR2Q8IWV8 1755 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 TNKSO95271 1327 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 ZNF532Q9HCE3 1301 aa3.63□□□□□ -1.83
LINC01416-201ENST00000563553 H3BNX3 289 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 hCG_1984214I3L0E3 225 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 DENRO43583 198 aaKnown RBP3.62□□□□□ -1.83
LINC01416-201ENST00000563553 IDH1O75874 414 aaKnown RBP3.62□□□□□ -1.83
LINC01416-201ENST00000563553 TTC4O95801 387 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 ZBED1O96006 694 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 OR52Z1P0C646 297 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 UQCRBP14927 111 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 TSHRP16473 764 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 ZNF12P17014 697 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 RXRAP19793 462 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 DDCP20711 480 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 SERPINB3P29508 390 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 ELLP55199 621 aaPredicted RBP3.62□□□□□ -1.83
LINC01416-201ENST00000563553 TUBA4AP68366 448 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 STK4Q13043 487 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 TARDBPQ13148 414 aaKnown RBP eCLIP3.62□□□□□ -1.83
LINC01416-201ENST00000563553 MED21Q13503 144 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 INAVAQ3KP66 663 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 FLYWCH1Q4VC44 716 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 KHDC1Q4VXA5 237 aaKnown RBP3.62□□□□□ -1.83
LINC01416-201ENST00000563553 ACSBG2Q5FVE4 666 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 SEL1L2Q5TEA6 688 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 ALKBH5Q6P6C2 394 aaKnown RBP3.62□□□□□ -1.83
LINC01416-201ENST00000563553 C1orf228Q6PIY5 440 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 RHBDF2Q6PJF5 856 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 IRF2BP2Q7Z5L9 587 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 PDSS2Q86YH6 399 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 ANKRD13CQ8N6S4 541 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 ZNF713Q8N859 430 aaPredicted RBP3.62□□□□□ -1.83
LINC01416-201ENST00000563553 KIAA0895Q8NCT3 520 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 TTC8Q8TAM2 541 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 CCDC110Q8TBZ0 833 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 FBXO25Q8TCJ0 367 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 DENND1AQ8TEH3 1009 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 NRG4Q8WWG1 115 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 MCUR1Q96AQ8 359 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 EFHD2Q96C19 240 aaPredicted RBP3.62□□□□□ -1.83
LINC01416-201ENST00000563553 MPP4Q96JB8 637 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 PRICKLE1Q96MT3 831 aaPredicted RBP3.62□□□□□ -1.83
LINC01416-201ENST00000563553 FNBP1Q96RU3 617 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 SIKE1Q9BRV8 207 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.62□□□□□ -1.83
LINC01416-201ENST00000563553 DUSP26Q9BV47 211 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 ADI1Q9BV57 179 aa3.62□□□□□ -1.83
LINC01416-201ENST00000563553 CADM1Q9BY67 442 aaKnown RBP3.62□□□□□ -1.83
LINC01416-201ENST00000563553 LRRC19Q9H756 370 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms