RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 SNRPD1P62314 119 aaKnown RBP10.27□□□□□ -0.77
SMG1-208ENST00000563448 TRAF2Q12933 501 aa10.27□□□□□ -0.77
SMG1-208ENST00000563448 MSLNQ13421 630 aaPredicted RBP10.27□□□□□ -0.77
SMG1-208ENST00000563448 SLC1A5Q15758 541 aa10.27□□□□□ -0.77
SMG1-208ENST00000563448 CFAP58Q5T655 872 aa10.27□□□□□ -0.77
SMG1-208ENST00000563448 CAPN12Q6ZSI9 719 aa10.27□□□□□ -0.77
SMG1-208ENST00000563448 PALM2Q8IXS6 379 aa10.27□□□□□ -0.77
SMG1-208ENST00000563448 PCDH20Q8N6Y1 951 aaKnown RBP10.27□□□□□ -0.77
SMG1-208ENST00000563448 OR6K2Q8NGY2 324 aa10.27□□□□□ -0.77
SMG1-208ENST00000563448 OR2W6PQ8NHA6 318 aa10.27□□□□□ -0.77
SMG1-208ENST00000563448 CSGALNACT1Q8TDX6 532 aa10.27□□□□□ -0.77
SMG1-208ENST00000563448 FRS2Q8WU20 508 aa10.27□□□□□ -0.77
SMG1-208ENST00000563448 TTC25Q96NG3 672 aa10.27□□□□□ -0.77
SMG1-208ENST00000563448 TRIM56Q9BRZ2 755 aaKnown RBP10.27□□□□□ -0.77
SMG1-208ENST00000563448 TDRD1Q9BXT4 1180 aaKnown RBP10.27□□□□□ -0.77
SMG1-208ENST00000563448 FBRSL1Q9HCM7 1045 aaKnown RBP10.27□□□□□ -0.77
SMG1-208ENST00000563448 CHKBQ9Y259 395 aa10.27□□□□□ -0.77
SMG1-208ENST00000563448 PCDHGC4Q9Y5F7 938 aa10.27□□□□□ -0.77
SMG1-208ENST00000563448 RAI2Q9Y5P3 530 aa10.27□□□□□ -0.77
SMG1-208ENST00000563448 NFS1Q9Y697 457 aa10.27□□□□□ -0.77
SMG1-208ENST00000563448 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.26□□□□□ -0.77
SMG1-208ENST00000563448 AP3B1O00203 1094 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 KAT7O95251 611 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 CPP00450 1065 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 PRLP01236 227 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 EPOP01588 193 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 SHBGP04278 402 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 ASGR2P07307 311 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 IL9P15248 144 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 GALK1P51570 392 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 AP1S1P61966 158 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 CARD16Q5EG05 197 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 SIRPB2Q5JXA9 342 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 ALS2CLQ60I27 953 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 DENND2CQ68D51 928 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 STAMBPL1Q96FJ0 436 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 IFT43Q96FT9 208 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 ZMYND15Q9H091 742 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 TRPV5Q9NQA5 729 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 PRDM6Q9NQX0 595 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 BFARQ9NZS9 450 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 ZC3H7BQ9UGR2 993 aaKnown RBP10.26□□□□□ -0.77
SMG1-208ENST00000563448 HCN2Q9UL51 889 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 MAD1L1Q9Y6D9 718 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 TBC1D3BA6NDS4 549 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 AGPSO00116 658 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 TIMM44O43615 452 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 BNIP3LO60238 219 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 FZD6O60353 706 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 PIGNO95427 931 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 PDHA1P08559 390 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 ABHD2P08910 425 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 NUDT17P0C025 328 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 TSHRP16473 764 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 NNMTP40261 264 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 TFF2Q03403 129 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 GALNT3Q14435 633 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 EIF4HQ15056 248 aaKnown RBP10.26□□□□□ -0.77
SMG1-208ENST00000563448 MYLK3Q32MK0 819 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 UNC5AQ6ZN44 842 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 DPY19L3Q6ZPD9 716 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 Q6ZVU0 165 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 CAMK1DQ8IU85 385 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 RYBPQ8N488 228 aaPredicted RBP10.26□□□□□ -0.77
SMG1-208ENST00000563448 CFAP36Q96G28 342 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 MTG2Q9H4K7 406 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 VPS37BQ9H9H4 285 aa10.26□□□□□ -0.77
SMG1-208ENST00000563448 HECAQ9UBI9 543 aaPredicted RBP10.26□□□□□ -0.77
SMG1-208ENST00000563448 ARIH1Q9Y4X5 557 aaPredicted RBP10.26□□□□□ -0.77
SMG1-208ENST00000563448 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.25□□□□□ -0.77
SMG1-208ENST00000563448 SPECC1L-ADORA2AF8WAN1 911 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 TRAFD1O14545 582 aaPredicted RBP10.25□□□□□ -0.77
SMG1-208ENST00000563448 NARSO43776 548 aaKnown RBP10.25□□□□□ -0.77
SMG1-208ENST00000563448 NDST3O95803 873 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 APODP05090 189 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 FGF1P05230 155 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 BMP1P13497 986 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 HLA-DPA1P20036 260 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 GRIA2P42262 883 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 CCNHP51946 323 aaPredicted RBP10.25□□□□□ -0.77
SMG1-208ENST00000563448 ST8SIA6P61647 398 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 FAM193AP78312 1265 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 POU6F1Q14863 301 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 PCID2Q5JVF3 399 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 IER5LQ5T953 404 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 STEAP4Q687X5 459 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 CASC4Q6P4E1 433 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 TXNDC11Q6PKC3 985 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 LRIG3Q6UXM1 1119 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 C3orf62Q6ZUJ4 267 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 MTERF4Q7Z6M4 381 aaKnown RBP10.25□□□□□ -0.77
SMG1-208ENST00000563448 PLPP6Q8IY26 295 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 ZNF366Q8N895 744 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 CHST14Q8NCH0 376 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 OR2A12Q8NGT7 310 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 PTPRN2Q92932 1015 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 P2RY13Q9BPV8 354 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 IL22Q9GZX6 179 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 SOX13Q9UN79 622 aa10.25□□□□□ -0.77
SMG1-208ENST00000563448 PLA2G4CQ9UP65 541 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms