RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 CES1P23141 567 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 WEE1P30291 646 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 VIPR2P41587 438 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 HYAL1Q12794 435 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 NAB1Q13506 487 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 SEPT6Q14141 434 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 GALNT3Q14435 633 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 LRRC14Q15048 493 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 CNGA3Q16281 694 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 LGSNQ5TDP6 509 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 RETSATQ6NUM9 610 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 NPAS3Q8IXF0 933 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 MGARPQ8TDB4 240 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 RANBP9Q96S59 729 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 MLXIPLQ9NP71 852 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 DZANK1Q9NVP4 752 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 PCDHGC4Q9Y5F7 938 aa18.22■□□□□ 0.51
COMMD4-208ENST00000563220 PRPF4O43172 522 aaKnown RBP eCLIP18.21■□□□□ 0.512e-7■■■■■ 39.9
COMMD4-208ENST00000563220 KRT38O76015 456 aa18.21■□□□□ 0.51
COMMD4-208ENST00000563220 PRKCGP05129 697 aa18.21■□□□□ 0.51
COMMD4-208ENST00000563220 TYRP14679 529 aa18.21■□□□□ 0.51
COMMD4-208ENST00000563220 HLA-DPA1P20036 260 aa18.21■□□□□ 0.51
COMMD4-208ENST00000563220 FSHRP23945 695 aa18.21■□□□□ 0.51
COMMD4-208ENST00000563220 ARNTP27540 789 aa18.21■□□□□ 0.51
COMMD4-208ENST00000563220 CTSOP43234 321 aaPredicted RBP18.21■□□□□ 0.51
COMMD4-208ENST00000563220 ARCN1P48444 511 aaKnown RBP18.21■□□□□ 0.51
COMMD4-208ENST00000563220 SERPINB9P50453 376 aa18.21■□□□□ 0.51
COMMD4-208ENST00000563220 RHOAP61586 193 aa18.21■□□□□ 0.51
COMMD4-208ENST00000563220 TCEAL5Q5H9L2 206 aa18.21■□□□□ 0.51
COMMD4-208ENST00000563220 PITRM1Q5JRX3 1037 aa18.21■□□□□ 0.51
COMMD4-208ENST00000563220 FAM78AQ5JUQ0 283 aa18.21■□□□□ 0.51
COMMD4-208ENST00000563220 ATXN7L2Q5T6C5 722 aaPredicted RBP18.21■□□□□ 0.51
COMMD4-208ENST00000563220 MROH9Q5TGP6 573 aa18.21■□□□□ 0.51
COMMD4-208ENST00000563220 NCEH1Q6PIU2 408 aa18.21■□□□□ 0.51
COMMD4-208ENST00000563220 MICALCLQ6ZW33 695 aa18.21■□□□□ 0.51
COMMD4-208ENST00000563220 TDHQ8IZJ6 230 aa18.21■□□□□ 0.51
COMMD4-208ENST00000563220 DENND1AQ8TEH3 1009 aa18.21■□□□□ 0.51
COMMD4-208ENST00000563220 OTUB2Q96DC9 234 aa18.21■□□□□ 0.51
COMMD4-208ENST00000563220 IARS2Q9NSE4 1012 aaKnown RBP18.21■□□□□ 0.51
COMMD4-208ENST00000563220 HEATR9A2RTY3 570 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 FAM47DPA6NHR8 397 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 NDST3O95803 873 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 FGF1P05230 155 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 PDHA1P08559 390 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 BMP8BP34820 402 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 SLC12A1Q13621 1099 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 FUT11Q495W5 492 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 SYCE2Q6PIF2 218 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 TMEM184AQ6ZMB5 413 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 GPR149Q86SP6 731 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 BANPQ8N9N5 519 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 FGF13Q92913 245 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 TDRD1Q9BXT4 1180 aaKnown RBP18.2■□□□□ 0.5
COMMD4-208ENST00000563220 RAI2Q9Y5P3 530 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 RFPL1O75677 317 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 VAPBO95292 243 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 PYGBP11216 843 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 RPA3P35244 121 aaPredicted RBP18.2■□□□□ 0.5
COMMD4-208ENST00000563220 SLC18A2Q05940 514 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 TSTD2Q5T7W7 516 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 PDPK2PQ6A1A2 396 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 ST13P5Q8NFI4 369 aaPredicted RBP18.2■□□□□ 0.5
COMMD4-208ENST00000563220 PPP2R3CQ969Q6 453 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 MTBPQ96DY7 904 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 RPL10LQ96L21 214 aaKnown RBP18.2■□□□□ 0.5
COMMD4-208ENST00000563220 ASB16Q96NS5 453 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 CPNE1Q99829 537 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 TM6SF2Q9BZW4 377 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 RABEP2Q9H5N1 569 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 SSU72Q9NP77 194 aaKnown RBP18.2■□□□□ 0.5
COMMD4-208ENST00000563220 MARK1Q9P0L2 795 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 SMG5Q9UPR3 1016 aaKnown RBP18.2■□□□□ 0.5
COMMD4-208ENST00000563220 KCTD3Q9Y597 815 aa18.2■□□□□ 0.5
COMMD4-208ENST00000563220 MROH6A6NGR9 719 aa18.19■□□□□ 0.5
COMMD4-208ENST00000563220 SLC9A3R1O14745 358 aaPredicted RBP18.19■□□□□ 0.5
COMMD4-208ENST00000563220 TRIM24O15164 1050 aa18.19■□□□□ 0.5
COMMD4-208ENST00000563220 LDB2O43679 373 aa18.19■□□□□ 0.5
COMMD4-208ENST00000563220 ZNF821O75541 412 aaPredicted RBP18.19■□□□□ 0.5
COMMD4-208ENST00000563220 PIRTP0C851 137 aa18.19■□□□□ 0.5
COMMD4-208ENST00000563220 GP5P40197 560 aa18.19■□□□□ 0.5
COMMD4-208ENST00000563220 SEC24CP53992 1094 aa18.19■□□□□ 0.5
COMMD4-208ENST00000563220 WDR4P57081 412 aaKnown RBP18.19■□□□□ 0.5
COMMD4-208ENST00000563220 TRAF2Q12933 501 aa18.19■□□□□ 0.5
COMMD4-208ENST00000563220 ARMC3Q5W041 872 aa18.19■□□□□ 0.5
COMMD4-208ENST00000563220 TRIM68Q6AZZ1 485 aa18.19■□□□□ 0.5
COMMD4-208ENST00000563220 STRA8Q7Z7C7 330 aa18.19■□□□□ 0.5
COMMD4-208ENST00000563220 SRLQ86TD4 932 aa18.19■□□□□ 0.5
COMMD4-208ENST00000563220 NAT16Q8N8M0 369 aa18.19■□□□□ 0.5
COMMD4-208ENST00000563220 NSUN3Q9H649 340 aaKnown RBP18.19■□□□□ 0.5
COMMD4-208ENST00000563220 GGA2Q9UJY4 613 aa18.19■□□□□ 0.5
COMMD4-208ENST00000563220 ARIH1Q9Y4X5 557 aaPredicted RBP18.19■□□□□ 0.5
COMMD4-208ENST00000563220 ALADP13716 330 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 GBP2P32456 591 aaPredicted RBP18.18■□□□□ 0.5
COMMD4-208ENST00000563220 STK19P49842 368 aaPredicted RBP18.18■□□□□ 0.5
COMMD4-208ENST00000563220 SLC18A1P54219 525 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 SLC20A2Q08357 652 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 DHCR24Q15392 516 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 GRTP1Q5TC63 336 aa18.18■□□□□ 0.5
COMMD4-208ENST00000563220 KIAA0930Q6ICG6 404 aaPredicted RBP18.18■□□□□ 0.5
COMMD4-208ENST00000563220 ANKRD54Q6NXT1 300 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms