RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 STYXQ8WUJ0 223 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 FEM1CQ96JP0 617 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 ZNF599Q96NL3 588 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 GATA5Q9BWX5 397 aaPredicted RBP9.9□□□□□ -0.82
SMG1-205ENST00000561947 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.9□□□□□ -0.82
SMG1-205ENST00000561947 SAGE1Q9NXZ1 904 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 TAS2R1Q9NYW7 299 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 APOBEC2Q9Y235 224 aaKnown RBP9.9□□□□□ -0.82
SMG1-205ENST00000561947 ZFP37Q9Y6Q3 630 aaPredicted RBP9.9□□□□□ -0.82
SMG1-205ENST00000561947 A0A087X1B8 175 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.89□□□□□ -0.83
SMG1-205ENST00000561947 MUSKO15146 869 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 HMGA1P17096 107 aaKnown RBP9.89□□□□□ -0.83
SMG1-205ENST00000561947 GLRBP48167 497 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 CDH4P55283 916 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 TAS2R39P59534 338 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 POU4F1Q01851 419 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 GNA12Q03113 381 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 ZNF460Q14592 562 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 RABGAP1LQ5R372 815 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 SWT1Q5T5J6 900 aaKnown RBP9.89□□□□□ -0.83
SMG1-205ENST00000561947 LIPMQ5VYY2 423 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 SLC39A5Q6ZMH5 540 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 TEX9Q8N6V9 391 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 GPATCH11Q8N954 259 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 PLD4Q96BZ4 506 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 CLSTN3Q9BQT9 956 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 CDH19Q9H159 772 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 MAGEH1Q9H213 219 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.89□□□□□ -0.83
SMG1-205ENST00000561947 HSFX1Q9UBD0 423 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 TAGLN3Q9UI15 199 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 ANAPC1Q9H1A4 1944 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 PRR5-ARHGAP8B1AHC4 643 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 TARM1B6A8C7 271 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 AURKAO14965 403 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 SLC7A4O43246 635 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 COCHO43405 550 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 KLHL2O95198 593 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 MYL4P12829 197 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 HOXD9P28356 352 aaPredicted RBP9.89□□□□□ -0.83
SMG1-205ENST00000561947 LEPRP48357 1165 aaKnown RBP9.89□□□□□ -0.83
SMG1-205ENST00000561947 CLCN5P51795 746 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 SLC12A2P55011 1212 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 ARHGAP8P85298 464 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 DLG1Q12959 904 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 UBAP2LQ14157 1087 aaKnown RBP9.89□□□□□ -0.83
SMG1-205ENST00000561947 IKBKEQ14164 716 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 RCN2Q14257 317 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 E2F5Q15329 346 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 TSNAXIP1Q2TAA8 658 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 ALG1LQ6GMV1 187 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 CNSTQ6PJW8 725 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 GALNT7Q86SF2 657 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 FSTL5Q8N475 847 aaPredicted RBP9.89□□□□□ -0.83
SMG1-205ENST00000561947 ZNF781Q8N8C0 355 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 IFT43Q96FT9 208 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 GPR78Q96P69 363 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 RNF208Q9H0X6 261 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 L3MBTL1Q9Y468 752 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 A0A0D9SEW6 157 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 SPECC1L-ADORA2AF8WAN1 911 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 H3BNC9 293 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 GJB3O75712 270 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 ABLIM3O94929 683 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 SOD2P04179 222 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 FGF1P05230 155 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 CCL5P13501 91 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 AOC1P19801 751 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 HLA-DPA1P20036 260 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 CPA2P48052 419 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 TLE2Q04725 743 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 BTG3Q14201 252 aaPredicted RBP9.89□□□□□ -0.83
SMG1-205ENST00000561947 TRIM60Q495X7 471 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 PREPLQ4J6C6 727 aaPredicted RBP9.89□□□□□ -0.83
SMG1-205ENST00000561947 RBM20Q5T481 1227 aaKnown RBP9.89□□□□□ -0.83
SMG1-205ENST00000561947 WLSQ5T9L3 541 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 CNKSR3Q6P9H4 555 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 DENND1CQ8IV53 801 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 BBS5Q8N3I7 341 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 OR7D4Q8NG98 312 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 NXNL1Q96CM4 212 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 MYRFLQ96LU7 910 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 PRICKLE1Q96MT3 831 aaPredicted RBP9.89□□□□□ -0.83
SMG1-205ENST00000561947 OMDQ99983 421 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 MFSD1Q9H3U5 465 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 TRPM5Q9NZQ8 1165 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 XPR1Q9UBH6 696 aa9.89□□□□□ -0.83
SMG1-205ENST00000561947 LTBP2Q14767 1821 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 B2RBV5 119 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 LDB2O43679 373 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 PEX11AO75192 247 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 STC2O76061 302 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 EPOP01588 193 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 GRIA4P48058 902 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 NUMBP49757 651 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 ARSDP51689 593 aa9.88□□□□□ -0.83
SMG1-205ENST00000561947 KPNA2P52292 529 aaKnown RBP9.88□□□□□ -0.83
SMG1-205ENST00000561947 RPS24P62847 133 aaKnown RBP9.88□□□□□ -0.83
SMG1-205ENST00000561947 USP4Q13107 963 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms