RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	TNFAIP8L3	Q5GJ75	292 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	STXBP5	Q5T5C0	1151 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	TMCO4	Q5TGY1	634 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	STEAP4	Q687X5	459 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	CAPN12	Q6ZSI9	719 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	C3orf62	Q6ZUJ4	267 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	HTR3D	Q70Z44	454 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	TDRP	Q86YL5	185 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	PALM2	Q8IXS6	379 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	RIBC1	Q8N443	379 aa	Predicted RBP	7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	TEX26	Q8N6G2	289 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	MAB21L3	Q8N8X9	362 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	LEMD2	Q8NC56	503 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	HJURP	Q8NCD3	748 aa	Predicted RBP	7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	OR7D4	Q8NG98	312 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	ARHGEF2	Q92974	986 aa	Known RBP	7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	CLDN23	Q96B33	292 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	ZNF707	Q96C28	371 aa	Predicted RBP	7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	TCEAL4	Q96EI5	215 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	CFAP36	Q96G28	342 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	ZNF599	Q96NL3	588 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	EBNA1BP2	Q99848	306 aa	Known RBP	7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	RPP25	Q9BUL9	199 aa	Known RBP	7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	SLC46A2	Q9BY10	475 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	STMN4	Q9H169	189 aa	Predicted RBP	7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	SLC25A51	Q9H1U9	297 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	ACSS3	Q9H6R3	686 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	PDF	Q9HBH1	243 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	PLAC1	Q9HBJ0	212 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	NT5M	Q9NPB1	228 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	CASS4	Q9NQ75	786 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	RBM22	Q9NW64	420 aa	Known RBP eCLIP	7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	ZDHHC7	Q9NXF8	308 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	EURL	Q9NYK6	297 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	BCCIP	Q9P287	314 aa	Known RBP eCLIP	7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	CFAP97	Q9P2B7	532 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	DNMT3B	Q9UBC3	853 aa	Known RBP	7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	FETUB	Q9UGM5	382 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	ZC3H7B	Q9UGR2	993 aa	Known RBP	7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	RABGEF1	Q9UJ41	708 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	ARHGAP26	Q9UNA1	814 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	NOVA2	Q9UNW9	492 aa	Known RBP	7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	ZNF510	Q9Y2H8	683 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	TBC1D30	Q9Y2I9	924 aa		7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	AAR2	Q9Y312	384 aa	Known RBP	7.63	□□□□□ -1.19
TPM1-231	ENST00000561395	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	7.62	□□□□□ -1.19
TPM1-231	ENST00000561395		A0A0D9SEW6	157 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	TCRBV9S1A1T	A0A576	114 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	TYW5	A2RUC4	315 aa	Known RBP	7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	SDR42E2	A6NKP2	422 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	LEFTY2	O00292	366 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	SCAMP3	O14828	347 aa	Known RBP	7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	MAP3K7	O43318	606 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	TBL1X	O60907	577 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	ANXA9	O76027	345 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	NEBL	O76041	1014 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	PAPLN	O95428	1278 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	RHOC	P08134	193 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	TDGF1	P13385	188 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	MGAT1	P26572	445 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	ATP5D	P30049	168 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	STX2	P32856	288 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	RPS9	P46781	194 aa	Known RBP	7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	GEM	P55040	296 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	OXCT1	P55809	520 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	SESN2	P58004	480 aa	Predicted RBP	7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	MAGOH	P61326	146 aa	Known RBP	7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	SKOR1	P84550	965 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	GABPB1	Q06547	395 aa	Predicted RBP	7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	MTAP	Q13126	283 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	ZNF177	Q13360	481 aa	Predicted RBP	7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	LBR	Q14739	615 aa	Known RBP	7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	EFTUD2	Q15029	972 aa	Known RBP eCLIP	7.62	□□□□□ -1.19	1e-5	■■■□□ 16.7
TPM1-231	ENST00000561395	RASA2	Q15283	850 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	TEAD2	Q15562	447 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	SLC5A9	Q2M3M2	681 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	ARHGAP15	Q53QZ3	475 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	PRSS36	Q5K4E3	855 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	GPR158	Q5T848	1215 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	EMC10	Q5UCC4	262 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	MARC1	Q5VT66	337 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	RNF43	Q68DV7	783 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	CXorf57	Q6NSI4	855 aa	Known RBP	7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	PARM1	Q6UWI2	310 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	ZNF783	Q6ZMS7	281 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	KDM7A	Q6ZMT4	941 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	UNC5A	Q6ZN44	842 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	TPRG1	Q6ZUI0	275 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	MTSS1L	Q765P7	747 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	SETD3	Q86TU7	594 aa	Predicted RBP	7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	ZNF354C	Q86Y25	554 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	CMTM8	Q8IZV2	173 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	CPXM2	Q8N436	756 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	CELF5	Q8N6W0	485 aa	Known RBP	7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	KDF1	Q8NAX2	398 aa	Predicted RBP	7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	OR52K2	Q8NGK3	314 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	OR52K1	Q8NGK4	314 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	SPATA22	Q8NHS9	363 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	GSDMB	Q8TAX9	411 aa		7.62	□□□□□ -1.19
TPM1-231	ENST00000561395	FBF1	Q8TES7	1133 aa		7.62	□□□□□ -1.19

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