RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 OR2AP1Q8NGE2 309 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 OR2W6PQ8NHA6 318 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 GABPB2Q8TAK5 448 aaPredicted RBP10.41□□□□□ -0.74
USP3-219ENST00000561326 FBF1Q8TES7 1133 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 CDKL2Q92772 493 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 FGF14Q92915 247 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 RMDN1Q96DB5 314 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 ASIC4Q96FT7 647 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 LRCH3Q96II8 777 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 EXOC2Q96KP1 924 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 TUBGCP5Q96RT8 1024 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 SRPK1Q96SB4 655 aaKnown RBP10.41□□□□□ -0.74
USP3-219ENST00000561326 PLA2G2FQ9BZM2 168 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 CIPCQ9C0C6 399 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 ATP13A3Q9H7F0 1226 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 UBE2ZQ9H832 354 aaPredicted RBP10.41□□□□□ -0.74
USP3-219ENST00000561326 HPS4Q9NQG7 708 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 SYBUQ9NX95 663 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 ELOVL2Q9NXB9 296 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 OGFRQ9NZT2 677 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 FETUBQ9UGM5 382 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 SLC24A2Q9UI40 661 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 RABGEF1Q9UJ41 708 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 SOX13Q9UN79 622 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 FCF1Q9Y324 198 aaKnown RBP10.41□□□□□ -0.74
USP3-219ENST00000561326 RPS6KL1Q9Y6S9 549 aa10.41□□□□□ -0.74
USP3-219ENST00000561326 LAMA3Q16787 3333 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 A0A1W2PQ67 120 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 TTC24A2A3L6 582 aaPredicted RBP10.4□□□□□ -0.74
USP3-219ENST00000561326 HEATR9A2RTY3 570 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 TBC1D3BA6NDS4 549 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 ANHXE9PGG2 379 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 K7ERQ8 282 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 RGS16O15492 202 aaPredicted RBP10.4□□□□□ -0.74
USP3-219ENST00000561326 SMAD6O43541 496 aaKnown RBP10.4□□□□□ -0.74
USP3-219ENST00000561326 SOCS5O75159 536 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 CDH16O75309 829 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 USP1O94782 785 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 SHBGP04278 402 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 PAMP19021 973 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 SERPINA4P29622 427 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 GJA4P35212 333 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 CTSOP43234 321 aaPredicted RBP10.4□□□□□ -0.74
USP3-219ENST00000561326 MSH2P43246 934 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 SLC6A11P48066 632 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 EPHB1P54762 984 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 RPL26P61254 145 aaKnown RBP10.4□□□□□ -0.74
USP3-219ENST00000561326 CRADDP78560 199 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 BCL2L1Q07817 233 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 OLIG2Q13516 323 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 HTR4Q13639 388 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 FRG1Q14331 258 aaKnown RBP10.4□□□□□ -0.74
USP3-219ENST00000561326 POU6F1Q14863 301 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 GEN1Q17RS7 908 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 MYLK3Q32MK0 819 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 ANKRD20A4Q4UJ75 823 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 CARD16Q5EG05 197 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 SIRPB2Q5JXA9 342 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 ARMC12Q5T9G4 340 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 STEAP4Q687X5 459 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 DENND5AQ6IQ26 1287 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 C22orf39Q6P5X5 142 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 PKN3Q6P5Z2 889 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 ZNF449Q6P9G9 518 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 UNC5AQ6ZN44 842 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 TMEM135Q86UB9 458 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 SUGP1Q8IWZ8 645 aaKnown RBP10.4□□□□□ -0.74
USP3-219ENST00000561326 KRT222Q8N1A0 295 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 MPP5Q8N3R9 675 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 RIBC1Q8N443 379 aaPredicted RBP10.4□□□□□ -0.74
USP3-219ENST00000561326 KDM1BQ8NB78 822 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 HLA-CQ95604 372 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 PGM2Q96G03 612 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 RANBP9Q96S59 729 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 CDX2Q99626 313 aaPredicted RBP10.4□□□□□ -0.74
USP3-219ENST00000561326 SH3GL2Q99962 352 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 KIFC1Q9BW19 673 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 CPEB1Q9BZB8 566 aaKnown RBP10.4□□□□□ -0.74
USP3-219ENST00000561326 TM6SF2Q9BZW4 377 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 ACSS3Q9H6R3 686 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 TMBIM4Q9HC24 238 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 MRM3Q9HC36 420 aaKnown RBP10.4□□□□□ -0.74
USP3-219ENST00000561326 PPANQ9NQ55 473 aaKnown RBP10.4□□□□□ -0.74
USP3-219ENST00000561326 PIH1D1Q9NWS0 290 aaKnown RBP10.4□□□□□ -0.74
USP3-219ENST00000561326 BCCIPQ9P287 314 aaKnown RBP eCLIP10.4□□□□□ -0.74
USP3-219ENST00000561326 HECAQ9UBI9 543 aaPredicted RBP10.4□□□□□ -0.74
USP3-219ENST00000561326 RPL26L1Q9UNX3 145 aaKnown RBP10.4□□□□□ -0.74
USP3-219ENST00000561326 FAM50BQ9Y247 325 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 RAI2Q9Y5P3 530 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 NUMBLQ9Y6R0 609 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 FAM169AQ9Y6X4 670 aa10.4□□□□□ -0.74
USP3-219ENST00000561326 C5orf42Q9H799 3197 aa10.4□□□□□ -0.75
USP3-219ENST00000561326 TCRBV9S1A1TA0A576 114 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 GRXCR2A6NFK2 248 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 SMIM23A6NLE4 172 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 HMGB1P1B2RPK0 211 aaPredicted RBP10.39□□□□□ -0.75
USP3-219ENST00000561326 ANKRD66B4E2M5 251 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 POC1B-GALNT4F8VUJ3 575 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 MBTPS2O43462 519 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 CRTAMO95727 393 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms