RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 IL1R2P27930 398 aa17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 ACADVLP49748 655 aa17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 CLDN6P56747 220 aa17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 DPYSQ14117 519 aa17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 ARHGAP36Q6ZRI8 547 aa17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 VPS36Q86VN1 386 aa17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 SYN2Q92777 582 aaPredicted RBP17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 ARHGEF26Q96DR7 871 aa17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 BTBD6Q96KE9 485 aa17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 BMFQ96LC9 184 aa17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 KLF6Q99612 283 aaPredicted RBP17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 C1QTNF2Q9BXJ5 285 aa17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 SP110Q9HB58 689 aa17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 GPR27Q9NS67 375 aa17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 KLHL11Q9NVR0 708 aa17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 UCKL1Q9NWZ5 548 aa17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 DONSONQ9NYP3 566 aa17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 CWC15Q9P013 229 aaKnown RBP17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 CAPN11Q9UMQ6 739 aa17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 BZW2Q9Y6E2 419 aaKnown RBP17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 URB1O60287 2271 aaKnown RBP17.41■□□□□ 0.38
CDC42BPB-208ENST00000561271 FFAR2O15552 330 aa17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 RFPL3O75679 317 aa17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 PCK1P35558 622 aa17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 RGRP47804 291 aa17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 SGCGQ13326 291 aa17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 ZNF542PQ5EBM4 170 aa17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 TPRG1LQ5T0D9 272 aa17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 AFMIDQ63HM1 303 aa17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 TTC7BQ86TV6 843 aa17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 ZSCAN30Q86W11 494 aa17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 PSTKQ8IV42 348 aaKnown RBP17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 TP53INP2Q8IXH6 220 aa17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 SLC25A45Q8N413 288 aa17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 HSPH1Q92598 858 aa17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 WRAP53Q9BUR4 548 aaKnown RBP17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 NUP85Q9BW27 656 aa17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 XPO4Q9C0E2 1151 aaKnown RBP17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 ZWILCHQ9H900 591 aa17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 DNAJC28Q9NX36 388 aa17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 ANAPC7Q9UJX3 599 aa17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 LUC7L2Q9Y383 392 aaKnown RBP17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 HS3ST3A1Q9Y663 406 aa17.4■□□□□ 0.38
CDC42BPB-208ENST00000561271 H3BRJ5 948 aa17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 TRIM38O00635 465 aa17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 FPGTO14772 594 aa17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 MMP20O60882 483 aa17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 PIAS2O75928 621 aa17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 TIMP2P16035 220 aa17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 DGKAP23743 735 aa17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 CASP14P31944 242 aa17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 IGFALSP35858 605 aa17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 NFKBIBQ15653 356 aa17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 SMAD1Q15797 465 aaKnown RBP17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 DPYSL2Q16555 572 aa17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 TXNRD3NBQ6F5E7 133 aa17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 GALNT15Q8N3T1 639 aa17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 TSEN2Q8NCE0 465 aaKnown RBP17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 DENND6BQ8NEG7 585 aa17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 CXorf40AQ8TE69 158 aa17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 IQCDQ96DY2 449 aa17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 CINPQ9BW66 212 aaPredicted RBP17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 CPEB1Q9BZB8 566 aaKnown RBP17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 DKK3Q9UBP4 350 aa17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 PCDHGA1Q9Y5H4 931 aa17.39■□□□□ 0.37
CDC42BPB-208ENST00000561271 TSPAN11A1L157 253 aa17.38■□□□□ 0.37
CDC42BPB-208ENST00000561271 SRRM3A6NNA2 597 aaPredicted RBP17.38■□□□□ 0.37
CDC42BPB-208ENST00000561271 SIGLEC6O43699 453 aa17.38■□□□□ 0.37
CDC42BPB-208ENST00000561271 PALMO75781 387 aa17.38■□□□□ 0.37
CDC42BPB-208ENST00000561271 XPAP23025 273 aaPredicted RBP17.38■□□□□ 0.37
CDC42BPB-208ENST00000561271 RABIFP47224 123 aa17.38■□□□□ 0.37
CDC42BPB-208ENST00000561271 PDE1CQ14123 709 aaPredicted RBP17.38■□□□□ 0.37
CDC42BPB-208ENST00000561271 FZD2Q14332 565 aa17.38■□□□□ 0.37
CDC42BPB-208ENST00000561271 PROX2Q3B8N5 592 aa17.38■□□□□ 0.37
CDC42BPB-208ENST00000561271 PARGQ86W56 976 aa17.38■□□□□ 0.37
CDC42BPB-208ENST00000561271 ZSWIM9Q86XI8 627 aa17.38■□□□□ 0.37
CDC42BPB-208ENST00000561271 CAMK1DQ8IU85 385 aa17.38■□□□□ 0.37
CDC42BPB-208ENST00000561271 FAM174AQ8TBP5 190 aa17.38■□□□□ 0.37
CDC42BPB-208ENST00000561271 MDM1Q8TC05 714 aa17.38■□□□□ 0.37
CDC42BPB-208ENST00000561271 TSC1Q92574 1164 aa17.38■□□□□ 0.37
CDC42BPB-208ENST00000561271 LENG8Q96PV6 779 aaPredicted RBP17.38■□□□□ 0.37
CDC42BPB-208ENST00000561271 ETNK2Q9NVF9 386 aa17.38■□□□□ 0.37
CDC42BPB-208ENST00000561271 COQ6Q9Y2Z9 468 aa17.38■□□□□ 0.37
CDC42BPB-208ENST00000561271 CELSR3Q9NYQ7 3312 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 UNC13CQ8NB66 2214 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 SPTY2D1-AS1A0A0U1RR47 76 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 BUB1BO60566 1050 aaPredicted RBP17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 TM7SF2O76062 418 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 CAPNS1P04632 268 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 PRKCGP05129 697 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 CYP1A2P05177 515 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 RARAP10276 462 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 AMPD1P23109 780 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 ARL4AP40617 200 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 HCAR3P49019 387 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 ZNF135P52742 658 aaPredicted RBP17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 SEMG2Q02383 582 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 SLC25A11Q02978 314 aaKnown RBP17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 PIGHQ14442 188 aaPredicted RBP17.37■□□□□ 0.37
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