RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 MIER3Q7Z3K6 550 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 ITIH5Q86UX2 942 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 LRRTM3Q86VH5 581 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 GATAD2AQ86YP4 633 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 PASD1Q8IV76 773 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 BEND2Q8NDZ0 799 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 ENGASEQ8NFI3 743 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 OR5M3Q8NGP4 307 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 CTCFLQ8NI51 663 aaPredicted RBP4.02□□□□□ -1.77
HERC1-211ENST00000560983 ZNF564Q8TBZ8 553 aaPredicted RBP4.02□□□□□ -1.77
HERC1-211ENST00000560983 SAP25Q8TEE9 199 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 IPO4Q8TEX9 1081 aaKnown RBP4.02□□□□□ -1.77
HERC1-211ENST00000560983 TCP11Q8WWU5 503 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 NINJ1Q92982 152 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 IGSF8Q969P0 613 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 CEP170P1Q96L14 293 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 MRGPRX1Q96LB2 322 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 SLC46A1Q96NT5 459 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 DCLRE1CQ96SD1 692 aaKnown RBP4.02□□□□□ -1.77
HERC1-211ENST00000560983 PNKPQ96T60 521 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 ACOX2Q99424 681 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 GPR174Q9BXC1 333 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 PRDM13Q9H4Q3 707 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 PDZD7Q9H5P4 517 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 XPNPEP1Q9NQW7 623 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 GEMIN8Q9NWZ8 242 aaKnown RBP4.02□□□□□ -1.77
HERC1-211ENST00000560983 HSFX1Q9UBD0 423 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 TCEAL9Q9UHQ7 104 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 EIF2B4Q9UI10 523 aaKnown RBP4.02□□□□□ -1.77
HERC1-211ENST00000560983 HIVEP1P15822 2718 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 ABCA2Q9BZC7 2435 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 F8P00451 2351 aa4.02□□□□□ -1.77
HERC1-211ENST00000560983 TLN1Q9Y490 2541 aaKnown RBP4.01□□□□□ -1.77
HERC1-211ENST00000560983 PCNX1Q96RV3 2341 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 PI4KAP42356 2102 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 ICE1Q9Y2F5 2266 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 A0A1B0GTQ1 180 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 A1L4Q6 167 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 MYMKA6NI61 221 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 DIRC3C9JPN6 131 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 M0QZQ0 153 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 LEFTY2O00292 366 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 ANP32CO43423 234 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 TMEM127O75204 238 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 EDN1P05305 212 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 CALM1P0DP23 149 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 CALM2P0DP24 149 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 CALM3P0DP25 149 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 PRF1P14222 555 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 HOXB2P14652 356 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 RXRAP19793 462 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 MX1P20591 662 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 GLRA2P23416 452 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 RPL9P32969 192 aaKnown RBP4.01□□□□□ -1.77
HERC1-211ENST00000560983 LSP1P33241 339 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 EIF2DP41214 584 aaKnown RBP4.01□□□□□ -1.77
HERC1-211ENST00000560983 WASP42768 502 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 IFNAR2P48551 515 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 CLK3P49761 638 aaKnown RBP4.01□□□□□ -1.77
HERC1-211ENST00000560983 CCT8P50990 548 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 NAPAP54920 295 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 MANFP55145 182 aaKnown RBP4.01□□□□□ -1.77
HERC1-211ENST00000560983 PSMC5P62195 406 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 MEF2AQ02078 507 aaPredicted RBP4.01□□□□□ -1.77
HERC1-211ENST00000560983 ST3GAL1Q11201 340 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 EMC2Q15006 297 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 DHCR24Q15392 516 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 SEPT7Q16181 437 aaKnown RBP4.01□□□□□ -1.77
HERC1-211ENST00000560983 BEAN1Q3B7T3 259 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 ZC2HC1CQ53FD0 456 aaPredicted RBP4.01□□□□□ -1.77
HERC1-211ENST00000560983 C19orf54Q5BKX5 351 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 LRCH2Q5VUJ6 765 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 LAYNQ6UX15 382 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 KDM7AQ6ZMT4 941 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 GDF7Q7Z4P5 450 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 EXOC8Q8IYI6 725 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 APPL2Q8NEU8 664 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 LINC00476Q8WZB0 136 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 MIB2Q96AX9 1013 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 ERLEC1Q96DZ1 483 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 SGF29Q96ES7 293 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 PRR11Q96HE9 360 aaPredicted RBP4.01□□□□□ -1.77
HERC1-211ENST00000560983 COQ10AQ96MF6 247 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 CCNL2Q96S94 520 aaPredicted RBP4.01□□□□□ -1.77
HERC1-211ENST00000560983 MMS19Q96T76 1030 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 TEKT3Q9BXF9 490 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 SERHL2Q9H4I8 314 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 POLR1BQ9H9Y6 1135 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 ITM2CQ9NQX7 267 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 GCNT4Q9P109 453 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 PRSS50Q9UI38 385 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 GDAQ9Y2T3 454 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 CACNA1DQ01668 2161 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 BAZ2BQ9UIF8 2168 aaKnown RBP4.01□□□□□ -1.77
HERC1-211ENST00000560983 MTORP42345 2549 aa4.01□□□□□ -1.77
HERC1-211ENST00000560983 ZNF469Q96JG9 3925 aaPredicted RBP4.01□□□□□ -1.77
HERC1-211ENST00000560983 PDCD11Q14690 1871 aaKnown RBP4.01□□□□□ -1.77
HERC1-211ENST00000560983 PHLPP2Q6ZVD8 1323 aa4□□□□□ -1.77
HERC1-211ENST00000560983 PTPRDP23468 1912 aa4□□□□□ -1.77
HERC1-211ENST00000560983 ERICH2A1L162 156 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms