RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 CAPN11Q9UMQ6 739 aa16.4■□□□□ 0.22
SPG21-211ENST00000560564 NENFQ9UMX5 172 aa16.4■□□□□ 0.22
SPG21-211ENST00000560564 RP1P56715 2156 aa16.4■□□□□ 0.22
SPG21-211ENST00000560564 SRRM3A6NNA2 597 aaPredicted RBP16.39■□□□□ 0.21
SPG21-211ENST00000560564 TRIM38O00635 465 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 PIAS2O75928 621 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 GYPCP04921 128 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 TIMP2P16035 220 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 ITIH2P19823 946 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 DGKAP23743 735 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 RGRP47804 291 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 HCAR3P49019 387 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 PAPOLAP51003 745 aaKnown RBP16.39■□□□□ 0.21
SPG21-211ENST00000560564 ZBED6P86452 979 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 FZD2Q14332 565 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 DPYSL2Q16555 572 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 ZSCAN23Q3MJ62 389 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 TDRD12Q587J7 1177 aaKnown RBP16.39■□□□□ 0.21
SPG21-211ENST00000560564 KDM7AQ6ZMT4 941 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 Q6ZSR6 202 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 PROSER1Q86XN7 944 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 IFT43Q96FT9 208 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 MRPL47Q9HD33 250 aaKnown RBP16.39■□□□□ 0.21
SPG21-211ENST00000560564 CWC15Q9P013 229 aaKnown RBP16.39■□□□□ 0.21
SPG21-211ENST00000560564 MYO1AQ9UBC5 1043 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 BZW2Q9Y6E2 419 aaKnown RBP16.39■□□□□ 0.21
SPG21-211ENST00000560564 CACNA1GO43497 2377 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 NBEAQ8NFP9 2946 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 LRP4O75096 1905 aa16.39■□□□□ 0.21
SPG21-211ENST00000560564 SMG1Q96Q15 3661 aaKnown RBP16.39■□□□□ 0.21
SPG21-211ENST00000560564 A0A087X0T9 212 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 SPTY2D1-AS1A0A0U1RR47 76 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 SIGLEC6O43699 453 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 RFPL3O75679 317 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 PIGNO95427 931 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 SERPING1P05155 500 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 C1SP09871 688 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 FAM228BP0C875 321 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 ZNF135P52742 658 aaPredicted RBP16.38■□□□□ 0.21
SPG21-211ENST00000560564 PFN3P60673 137 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 TPM4P67936 248 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 RAD51Q06609 339 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 ACAP1Q15027 740 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 CCDC157Q569K6 752 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 PPP6R3Q5H9R7 873 aaPredicted RBP16.38■□□□□ 0.21
SPG21-211ENST00000560564 ARHGAP36Q6ZRI8 547 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 PTAR1Q7Z6K3 402 aaPredicted RBP16.38■□□□□ 0.21
SPG21-211ENST00000560564 DCP2Q8IU60 420 aaKnown RBP16.38■□□□□ 0.21
SPG21-211ENST00000560564 TP53INP2Q8IXH6 220 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 GALNT15Q8N3T1 639 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 CENPTQ96BT3 561 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 IQCDQ96DY2 449 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 NCAPGQ9BPX3 1015 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 THAP2Q9H0W7 228 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 IFNKQ9P0W0 207 aa16.38■□□□□ 0.21
SPG21-211ENST00000560564 LOC400499M0QZD8 3231 aa16.37■□□□□ 0.21
SPG21-211ENST00000560564 FAM149AA5PLN7 773 aa16.37■□□□□ 0.21
SPG21-211ENST00000560564 ARHGAP42A6NI28 874 aa16.37■□□□□ 0.21
SPG21-211ENST00000560564 BUB1BO60566 1050 aaPredicted RBP16.37■□□□□ 0.21
SPG21-211ENST00000560564 NME1P15531 152 aaKnown RBP16.37■□□□□ 0.21
SPG21-211ENST00000560564 CKMT2P17540 419 aa16.37■□□□□ 0.21
SPG21-211ENST00000560564 PTMSP20962 102 aa16.37■□□□□ 0.21
SPG21-211ENST00000560564 RABIFP47224 123 aa16.37■□□□□ 0.21
SPG21-211ENST00000560564 CSNK1DP48730 415 aa16.37■□□□□ 0.21
SPG21-211ENST00000560564 CLDN6P56747 220 aa16.37■□□□□ 0.21
SPG21-211ENST00000560564 ZNF211Q13398 564 aaPredicted RBP16.37■□□□□ 0.21
SPG21-211ENST00000560564 TXNRD3NBQ6F5E7 133 aa16.37■□□□□ 0.21
SPG21-211ENST00000560564 POLNQ7Z5Q5 900 aa16.37■□□□□ 0.21
SPG21-211ENST00000560564 TTC7BQ86TV6 843 aa16.37■□□□□ 0.21
SPG21-211ENST00000560564 ZSWIM9Q86XI8 627 aa16.37■□□□□ 0.21
SPG21-211ENST00000560564 NIPA2Q8N8Q9 360 aa16.37■□□□□ 0.21
SPG21-211ENST00000560564 TSEN2Q8NCE0 465 aaKnown RBP16.37■□□□□ 0.21
SPG21-211ENST00000560564 OR4C6Q8NH72 309 aa16.37■□□□□ 0.21
SPG21-211ENST00000560564 HCAR2Q8TDS4 363 aa16.37■□□□□ 0.21
SPG21-211ENST00000560564 NSMCE3Q96MG7 304 aa16.37■□□□□ 0.21
SPG21-211ENST00000560564 SUV39H2Q9H5I1 410 aa16.37■□□□□ 0.21
SPG21-211ENST00000560564 DKK4Q9UBT3 224 aa16.37■□□□□ 0.21
SPG21-211ENST00000560564 KLF15Q9UIH9 416 aa16.37■□□□□ 0.21
SPG21-211ENST00000560564 COL27A1Q8IZC6 1860 aaPredicted RBP16.36■□□□□ 0.21
SPG21-211ENST00000560564 GOLGA6L19H0YKK7 550 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 NEMP1O14524 444 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 FPGTO14772 594 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 MUSKO15146 869 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 MMP20O60882 483 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 CSF2P04141 144 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 CYP1A2P05177 515 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 CDK4P11802 303 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 ACP1P24666 158 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 HNRNPH3P31942 346 aaKnown RBP16.36■□□□□ 0.21
SPG21-211ENST00000560564 IGFALSP35858 605 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 SUOXP51687 545 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 SLC25A11Q02978 314 aaKnown RBP16.36■□□□□ 0.21
SPG21-211ENST00000560564 SGCGQ13326 291 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 ILKQ13418 452 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 SMTNL2Q2TAL5 461 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 TMEM52BQ4KMG9 183 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 ZNF542PQ5EBM4 170 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 PARGQ86W56 976 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 TMPRSS12Q86WS5 348 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 TP53I13Q8NBR0 393 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms